Gene Nther_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1538 
Symbol 
ID6315423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1618680 
End bp1619768 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content29% 
IMG OID642643913 
ProductPeptidase M23 
Protein accessionYP_001917704 
Protein GI188586159 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0000553648 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAAGTTT CTGTAATACC TTCTAATTAT ATTATAAATG TTACTAAAGA GGTTAATTCT 
CAAATAGAGT CTGATTTTTT ACTTAGAGCA GTAAAGGTAA AGAATAATCT GGAAGAGTCT
GTAAGATTAA TTAATATTTC TTTCACAGCT ATAGTAGACG GTAGACCAGT TAAAAAAATT
GTATATTCGG AGGAAATGAT AAAAAATAAT GCAAGTGAAC TCAAAAAGAG TTTAGAAAAA
ATACAAAATA TAGGTTCTCT GTTGATTCTT GGAACTACAA ATTTTTGGGA ATATGAAATA
CTATCGGAGA CATCAAAGTT AGAGCCTAAT CAGGAGACCG GTATTTTATT AGAACATTTT
AAAATTCTCG ATAAAGAAGC TGTTGATAAA TGTATTTTAG AGATTTTTTA TAAAAATATG
AATGATAAAG AGAACAAGAT AACTAATGAG ATATTGGTAC AAAAATATCA TAACAATTAT
GAATATATTT TACCGGTTAA AGGATCATGG GTAGTCACAA ACAATTATAA TGATATATAT
AGTCACCGCC GTACCTTAAG TCAAGAGTTT GCATTAGATT TTATTCAAAT GAATTCAGAT
TTTGTATTAA CGACTAATGG TAATACTTCT AATAAAAATT ATTCTTGTTA TGGTGAGGAA
GTTTATGCAA TTGCCGATGG AGAAGTAGTA GATTGTTTCG CTGATTTTCC TGAAAATCCT
CCTGGATTTG GCTCAAGACT CGATAAAGAA AAATGGAGCG AATTAGAATA TAAACATGGT
TTTGTTACCA GTATGCTTGG TAACTATATA ACAATAAAAC ATGGAAGGAA TGAATATTCA
CTTTATGCCC ATTTAATTCC AAGAAGTTTA AAAGTAACTA CAAGGGATAA AGTGCATCAA
GGAGATATAA TAGGTGAGAT AGGCAATTCT GGTAATTCAG ATGCACCTCA TCTTCATTTT
CAATTAATGT CTGGATCGGA TTTTTTAACT GCCCGAGGAT TACCATGCAC TTTTACAAAT
ATAAAGGATA TGGTAGGAGA AGATATAAGC TTTTTAGATG AAAATAATAA AATTATATAT
ACAGTTTAG
 
Protein sequence
MKVSVIPSNY IINVTKEVNS QIESDFLLRA VKVKNNLEES VRLINISFTA IVDGRPVKKI 
VYSEEMIKNN ASELKKSLEK IQNIGSLLIL GTTNFWEYEI LSETSKLEPN QETGILLEHF
KILDKEAVDK CILEIFYKNM NDKENKITNE ILVQKYHNNY EYILPVKGSW VVTNNYNDIY
SHRRTLSQEF ALDFIQMNSD FVLTTNGNTS NKNYSCYGEE VYAIADGEVV DCFADFPENP
PGFGSRLDKE KWSELEYKHG FVTSMLGNYI TIKHGRNEYS LYAHLIPRSL KVTTRDKVHQ
GDIIGEIGNS GNSDAPHLHF QLMSGSDFLT ARGLPCTFTN IKDMVGEDIS FLDENNKIIY
TV