| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1510 |
|---|
| Symbol | |
|---|
| ID | 6315638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 1583504 |
|---|
| End bp | 1585435 |
|---|
| Gene Length | 1932 bp |
|---|
| Protein Length | 643 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 642643888 |
|---|
| Product | KAP P-loop domain protein |
|---|
| Protein accession | YP_001917679 |
|---|
| Protein GI | 188586134 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.706242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 3.38847e-17 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGATTAAGC ATTTAAAAAA TTTTTTTGTG AGTAATCAAA ATAAAGATGA AACAATGCTT
AGTAATAAAA TATGTGTTAA TAATGACATT ATTGAAACTT TGAGAAATTA TATTATTAAG
GATTCTAATG ATTTTGCTAT CGTTCTTACA GGGCCTTGGG GATGTGGAAA AACTTTTTTT
TGGAATAATT ACCTTTCAGA AATAGTTAAA CAAGAGAGTA AAACACCTGT ATATGTTTCT
CTGTATGGTG TAAAAGAAGT CAACGAAATT GATGTTAAGA TATTTTTTGA AATTTTTTCT
TCACTTCCAT CAGTAAAAAA ATCTGTGCGA GAGCTTAAAT TTAATAAAGA ACATGGAAAA
ATGTTATTAA ACACTGCTAG TTCTTTTGGA CTGTTAAAAA GAGATAAATA TAGAGTCAAT
GTGTCCGAAT TATATTCTCT AGGAAAAGTT GTTTTGTGTT TTGATGATCT TGAAAGAAGT
AGTTTAACAA CAAAAGAAAT ATTAGGTCAT ATCAATAATT ATTTAGAACG TGATAACATA
CCAACTATTA TAATAGCTAA TGAAGAACAA ATAGAAAAAG ATGATGATTA TTTTGATTTA
AAGGAAAAAA GTATCGGTAG AACTATACGC ATTAAAAACG ACCCAAATTT AATCCTATAT
AATTTAATAG AATCATCCTT TAAGAATAAC AGATATGCAG AGTTTTTATT AACTCATCAA
TCACTAATAT TAGAGACTTT TAAAAAAAGC GAAATGGAAA ATTTCAGAAT AATAAAGCAA
ACTTTACACG ACTTTGAATT AATCTATAAT GAATTAGATA GTAATTACAA TAAAGAAAAT
TTAACAATTA TTGAAAATGA AATAGAAAAT ATGCTTTGTT TCACTTTATC TTGTTCATTT
GAGATAAGAA AAAATAGTAG TATTAGTTCT GCTTTGCACA ACATTAAAAG TAATCAGGAA
TTTATGTCGC TTATAATACA ATATTCTATG GAAAAAGCTA TGAAAAAGGA TACTCAACAG
GAAGAGCCTA CTAGAGCAAG TCTGTTAGAC GATTTCAGAA GAAAATATTT TGGTTATACT
AATTTTAAAA AAGTTAGGAT TTTCTTCGAA TCCATTCATC TTTTTATAAC TACGGGAATA
TTTCATAAAA ATGATTTTAA AAAAGAAATC ACTAAAATAA TACAAGATAA GCAACAAGAA
ATTTCGGATC ATAATTTAAT ATTTGATTAT ACATTTACAA ACCCTGAACA AATTTGTGAA
GAATTTTTTG ATGAAGCTTT AAAGAATACA ATAATAAAAT TATCAAATGG TGAAATGTAT
TTAAGTGAAT ACCCAAAAGC CTATCTTACA TTTAGAAACA TGTCTAAAAT AATTGAACTG
CCTCTTGATT CTGATAGTCT AAAACAATTT ATTTTGAATG GTATGATAGA ATCTTCTACA
CAAACTGAAC CCAACAATTA TTTAAAAGAT ACTGATCTAC ATTTTCCGTC AAGTATATAT
AAAGATTTAT CGTCAAAAGA GTCAAATGAT TTTAAAGAAA TAGAAGATAA ATTAAAAGAA
CTAAATGATG AATTGAAAAG TCAATTTTAC AAAAATAAAT CGAAAATGGT ATGTGAATGG
TTTGAAAAGG AGGAGAAAAA TGAACTTTGG AATATTTTTA ACGATCCTAT TGATTATTGG
TACTATAGCT TATCTACTGA AGATATTAGA TCCATTTTAT GTGATAGCTC AATAAATATG
GTTAATTATT TATACGAACT GCTAGAGTAT AGGCAAAAAA ACTTTGATTT AAATGAAAAT
GAGTTAGCTT TCTTAAAGGA AATGTATAAT ATTATAAATA ATTTATTACA AGATAATACT
ACTTCTAAAT TAAGAAAAAT TATACTATAT AAAATCAAAT TAACTTTAGA AAATAAGTTG
AATCTCAAAT AG
|
|---|
| Protein sequence | MIKHLKNFFV SNQNKDETML SNKICVNNDI IETLRNYIIK DSNDFAIVLT GPWGCGKTFF
WNNYLSEIVK QESKTPVYVS LYGVKEVNEI DVKIFFEIFS SLPSVKKSVR ELKFNKEHGK
MLLNTASSFG LLKRDKYRVN VSELYSLGKV VLCFDDLERS SLTTKEILGH INNYLERDNI
PTIIIANEEQ IEKDDDYFDL KEKSIGRTIR IKNDPNLILY NLIESSFKNN RYAEFLLTHQ
SLILETFKKS EMENFRIIKQ TLHDFELIYN ELDSNYNKEN LTIIENEIEN MLCFTLSCSF
EIRKNSSISS ALHNIKSNQE FMSLIIQYSM EKAMKKDTQQ EEPTRASLLD DFRRKYFGYT
NFKKVRIFFE SIHLFITTGI FHKNDFKKEI TKIIQDKQQE ISDHNLIFDY TFTNPEQICE
EFFDEALKNT IIKLSNGEMY LSEYPKAYLT FRNMSKIIEL PLDSDSLKQF ILNGMIESST
QTEPNNYLKD TDLHFPSSIY KDLSSKESND FKEIEDKLKE LNDELKSQFY KNKSKMVCEW
FEKEEKNELW NIFNDPIDYW YYSLSTEDIR SILCDSSINM VNYLYELLEY RQKNFDLNEN
ELAFLKEMYN IINNLLQDNT TSKLRKIILY KIKLTLENKL NLK
|
|---|
| |