Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1493 |
Symbol | |
ID | 6314829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1564312 |
End bp | 1565874 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642643873 |
Product | VanW family protein |
Protein accession | YP_001917664 |
Protein GI | 188586119 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00863101 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTAAAA AGTATTATGA CAATTTTGAC AAAAAGTCTA AAAAGCTTAT CAGTATTGTA ATCCCTGTTA TGATATTTTT TATGTTCATG ATGTTGGGCC TAGGAGGATA TCAACAGTAC AGATATCAAA ACACTTTTAT TCCCGGTATT TCAATTGCTG GGATTAATAT AAGTGAAAAA AGTCATACTC AGGTAAAAAA ATTGCTAGAA CAAGAGCTTG AAAACATGTC TGATCAAAAG ATTATTTTAG AACACCAAGA AAACACGTGG GAATACAATT TTCATGAACT CGGGATGGAT TGGATGGTTA AAGCTTCCTT TGATAAAGCC CTTGATAATG ATGAATTATC CTTTTTTGAA GGGATAAAGC TGCTGTTAGC TGAAATATCT CAAGATCAAG AAATCCAATT AGAACATGAA CTTGATGAAT CTAAAACAAA AAGTATTGTT AGTAATTTGA GAGACGAGAT TGCTCAGAAA CCTCAGGATG CTGAATATCA AGTCAATAAA TATGCCCAGT CTGTTTCTAT AAAACCCCAT CAAAATGGAA AAGAAATCGA TGAATCAAAA TTTATATCTG AATTAAATTA CTTACTCGAA CAAATAAGCC AAGATCTAAG AAGCTTTACT GATGCTGAAT TTGTTATAGA AATTCCAACT ACCACTGTGG AACCCGACAC ACTAACAGAA GAATTACAGG AATTGGGGAT TGATACCCTG ATAAGTACCT TTGAAACACA TTACGACGAA GATGATGAGC AAAGAGTCAC TAATATTGAA CTTGCTTCTG AAAAGCTGGA TAACAAAAAA CTAGAGCCAG GAGAAAAATT ATCTTTTAAT GAAGTCGTAG GTCCCAGAAC GAGAGAAAGG GGCTATCAAG AAGCCCCTGT TATCATAGAT GGTGAACTGG TTGATGGTTT AGGCGGAGGT ATTTGTCAGG TTTCTACTAC TTTGTACAAT TCTGTTTTAA AGGCAGGTAT AATTCCAATA GAAAGGTCTC CTCATGGCAT ACCAGTAGAA TATGTTTCCC TGGGTAGAGA TGCCGCAGTA GCATACGACT ATCTTGACCT GGTGTTTGAA AATCACAGGG ACAATGGAAT TCTAATATCC ACCCTGGTAG ATGAAAACAG ATTGAGGGTC GATATTTACG GAAGCCAAGA ATCCCATGAT TACACGATAA GAACGGAAGA TTATCAAGAA ATCCACCCGG ATACCATCTA TTTTTTAAAA ACAGATGATG GTGAACGGGT GGAAATTAGT CAAGAAGAAA AACAGGAATT GTTGGATACC AATGAAAGTG ATGAAAATGT GAATGAGAAT GATTATGATA ATGAAGAAAA TGATCTTGAA GAAACCAACA CAAATAATGA TGACAAAGAA CACATAGAAG ATACTAACTA CGAAATCACT GAACTTCAAA GGGGTAGACT TGGTTATCAG ATAGAAGTCT GGTTACTAAC ATATAAAAAC GATGAAAAAG TTGACAAAGA ACATATAGCT ACGGATATTT ACCCATCAAG AGATGAAAAA TACTTAATCG AATTAGAGGA TTCTGATCAA TAA
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Protein sequence | MFKKYYDNFD KKSKKLISIV IPVMIFFMFM MLGLGGYQQY RYQNTFIPGI SIAGINISEK SHTQVKKLLE QELENMSDQK IILEHQENTW EYNFHELGMD WMVKASFDKA LDNDELSFFE GIKLLLAEIS QDQEIQLEHE LDESKTKSIV SNLRDEIAQK PQDAEYQVNK YAQSVSIKPH QNGKEIDESK FISELNYLLE QISQDLRSFT DAEFVIEIPT TTVEPDTLTE ELQELGIDTL ISTFETHYDE DDEQRVTNIE LASEKLDNKK LEPGEKLSFN EVVGPRTRER GYQEAPVIID GELVDGLGGG ICQVSTTLYN SVLKAGIIPI ERSPHGIPVE YVSLGRDAAV AYDYLDLVFE NHRDNGILIS TLVDENRLRV DIYGSQESHD YTIRTEDYQE IHPDTIYFLK TDDGERVEIS QEEKQELLDT NESDENVNEN DYDNEENDLE ETNTNNDDKE HIEDTNYEIT ELQRGRLGYQ IEVWLLTYKN DEKVDKEHIA TDIYPSRDEK YLIELEDSDQ
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