| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1488 |
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| Symbol | |
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| ID | 6315500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1560152 |
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| End bp | 1560556 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642643868 |
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| Product | methylmalonyl-CoA epimerase |
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| Protein accession | YP_001917659 |
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| Protein GI | 188586114 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.383789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.131397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGATA AACTAGATCA TATTGGTATT GCAGTGAAAG ATCTGCAAGA AGCCCTGGAC
TTTTATGAAA ATCAATTACA AATTGAAGCT ACCGGCACGG AAGAGGTTTC CGAACAAAAA
GTCAAAGTGG CTTTCTTACC TGTAGGTGAT ACAAAATTGG AATTACTGGA GGGGACTACA
GAAGACAGCC CCATAAATAA GTTTATTGAG AAAAAAGGTG CTGGTGTCCA ACATATAGCC
CTTCGCGTGG ACGACATAGA ACAAAGCTTG GAAGACTTAA AATCAAAAGG TGTTAAGCTG
ATTGATGAAA AGCCAAGATA TGGTGCAGGT GGGGCAAAGA TTGCCTTTGT ACATCCAAAA
AGTACGGGTG GCACTTTAAT AGAGCTTTGC GAGCGTGAAG AATAA
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| Protein sequence | MIDKLDHIGI AVKDLQEALD FYENQLQIEA TGTEEVSEQK VKVAFLPVGD TKLELLEGTT
EDSPINKFIE KKGAGVQHIA LRVDDIEQSL EDLKSKGVKL IDEKPRYGAG GAKIAFVHPK
STGGTLIELC EREE
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