Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1460 |
Symbol | |
ID | 6314937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1529352 |
End bp | 1531052 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642643840 |
Product | beta-lactamase domain protein |
Protein accession | YP_001917631 |
Protein GI | 188586086 |
COG category | [R] General function prediction only |
COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCAGCAA GAAAACAGAA TAATAGAAAT GGTAATGGCT CCAGAAATTC ATTACAAGTC ATTCCCTTGG GCGGGGTCGG TGAAATTGGA AAAAATATGT TTGTAATTAA GTACGGGAAT GATATGATTG TCATTGACGC CGGATTAAAA TTTCCCGATG AAGATATGTT GGGAGTAGAT TTCGTCATTC CTGACATGTC TTATCTGTTT GAACATAAGG ACAACATTAA AGGAATTTTC TTAACCCATG GGCATGAAGA TCACATCGGG GCTTTACCGT ATTTAATGAA AAAAATTGAT GCACCAGTTT ATGGTACTAA ACTAACTTTA GGTTTGGCTG AACGTAAATT GGGAGAACAA CCTATTCAAA AGTCGATTTC TTTAAAGAAG ATATTACCTG GCAAAACTAT GCAATTAGGT CCATTTAAGA TGGAATTTTT CTCAACTAAC CACAGTATTC CAGATTCAAT TGGCATAGTT GTTCATACAC CTGAAGGAAC TATAGTCCAT ACAGGAGATT TTAAATTTGA CCATACACCA GTTAGTGGTA AAGTAGCAGA TTATAATAAA CTTGCTGAAC TGGGAAATAA GGGAGTACTA TGCTTACTAT CGGATAGTAC CAATGCTGAA AGGCCGGGAT ATACTGAAAG TGATAGAACA GTGGGAGAAC GACTTGATGA AATCTTTCGC CAAGCTCCCA AAAGGATTAT CCTGGCAACT TTTGCCTCTA ATATATACAG AATTCAGCAA GTTATTAACT CAGCCAAAAA GTATGGTAAA AAAGTCGGAG TCGTAGGTCG CAGTATGATA AATGTGATTG AAGCGGCTTC AGAGCTAGGT TATCTTGAAA ATGTAGACGA TGTGGTGATT GATGATATAG AAAGAGTCAA TCAATTGCCT CTGGAAAAAA CTGTGTTGCT AACTACGGGC AGTCAAGGAG AGCCCATGAG CGCATTAACC AGGATTGCTA CTGATGACCA TCGAAAAGTC GAAATTATGC CCCATGATAC TGTGGTGATA GCTGCAACAC CTATTCCAGG AAACGAAAAG TTAATTTCTA GAAGTATAGA TAATTTGTTT AAACGAGGTG CCCATGTCAT CTATCAATCT GTTTCCGGAG TCCATGTATC CGGTCATGGA AGTCAGGAAG AATTGAAAAT GATGCTGAAC CTTGTTAAAC CTAAGTATTT AATCCCTTTC CATGGCGAGT ACAGAATGCA GGTACATCAT AAAAACGTAG CAGAAAAGTT AGGTATGCCA TCAAAAAATG TATTTTTAGC AGAAAATGGT GAAGTAATTG AATTTAACAG AAAACGAGGC AAAGTTAATG GCAAGGTTCC TGCAGGTAAA GTTTTAGTTG ATGGTTTAGG TGTAGGTGAT GTAGGTAATA TCGTTCTAAG AGATCGACGA CTGTTAAGCC AGGATGGTAT CCTGATTGTA GTGATTGGTG TAGATAAACA GAACAAAACA TTAATTGCCG GCCCGGATAT AGTTTCTAGA GGATTTGTAT ATGTCAGAGA ATCAGAAGAG TTGTTAGAAG AGGCCCGTGA ACATGTTGTT AAAGCTGTAA ACAAGATGTC AAAAAGTAAA ATGAATGAGT GGCAGGCAAT TAAGAGTTCT GTCAAAGATG TTTTAGGTCA ATATCTATGG GAAAAAACCC GGAGACGTCC CATGATTCTT CCAATAATTA TGGAAGTTTA A
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Protein sequence | MSARKQNNRN GNGSRNSLQV IPLGGVGEIG KNMFVIKYGN DMIVIDAGLK FPDEDMLGVD FVIPDMSYLF EHKDNIKGIF LTHGHEDHIG ALPYLMKKID APVYGTKLTL GLAERKLGEQ PIQKSISLKK ILPGKTMQLG PFKMEFFSTN HSIPDSIGIV VHTPEGTIVH TGDFKFDHTP VSGKVADYNK LAELGNKGVL CLLSDSTNAE RPGYTESDRT VGERLDEIFR QAPKRIILAT FASNIYRIQQ VINSAKKYGK KVGVVGRSMI NVIEAASELG YLENVDDVVI DDIERVNQLP LEKTVLLTTG SQGEPMSALT RIATDDHRKV EIMPHDTVVI AATPIPGNEK LISRSIDNLF KRGAHVIYQS VSGVHVSGHG SQEELKMMLN LVKPKYLIPF HGEYRMQVHH KNVAEKLGMP SKNVFLAENG EVIEFNRKRG KVNGKVPAGK VLVDGLGVGD VGNIVLRDRR LLSQDGILIV VIGVDKQNKT LIAGPDIVSR GFVYVRESEE LLEEAREHVV KAVNKMSKSK MNEWQAIKSS VKDVLGQYLW EKTRRRPMIL PIIMEV
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