Gene Nther_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1459 
Symbol 
ID6314936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1528291 
End bp1529178 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content36% 
IMG OID642643839 
Productdihydrodipicolinate synthase 
Protein accessionYP_001917630 
Protein GI188586085 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.503779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAGGGT TTGGTGAGTT AATAACTGCC ATGATCACAC CCTTTAACAA GCAAGGTGAA 
CTGGCAACCG AAAATTGTGT AAAATTAGCC AAAAAACTCG TGAATGAACA AAACTCAGAT
GCCTTAGTTT TATCTGGAAC TACGGGGGAA TCACCTACAT TAAGTACAGA AGAAAAGTTG
ACTTTGTTTC AACTTATAAC AGAAAAGGTA GGCGGAAACG CTAACATTAT AGCAGGTACC
GGAAGTTACA GTACGAAAGA AACCTTGGAG TTGACCAAAA AGGCTGAAGA AGTAGGAGTC
CATGGTATAA TGCTGGTCAC TCCATACTAT AATAAACCTA CTCAAGGAGA TTTATATAAA
CATTTCAAGA CAATAGCCCA AAAGACTTCT CTGCCGATTA TGTTGTATAA TGTCCCTAAG
CGTACTGGCG TAGATATGTC TCAAGATACA ATCTTAAAAT TAGCAGAAAT AGATAATATA
ATTGCTTTGA AAGAAGCCAG TGGAGACTTT AATAAAATTG CCAATGTAAT CAGAGAAACT
AGAGGAGAGT TTGATGTTTA CAGTGGTGAT GATATTAGCT TAATGCCTGT TTTAAGTCTT
GGAGGGACTG GTGTAGTAAG TGTTGCTTCA CATCTAATAG GTAAAGAGCT AAAAGAAATA
ATAGATGCTT ATCACGCAAA TAATTCCAGA AAAGCTTTGG AATTGTTTCA AGAAATCTAT
CCTTTCATAA CGGCATTATT AGTTAAGACA AATCCAATTC CCATAAAAGC TGCAGTCAAC
ACTCATTTAA TGCAAGTAGG AAGTGTACGT CCACCTTTAT ATGATCTAAG TGAAAAGGAG
CTAGAACAGC TATCAGAGGT GTATAAATGG TCAGTAGGTA AATACTAA
 
Protein sequence
MRGFGELITA MITPFNKQGE LATENCVKLA KKLVNEQNSD ALVLSGTTGE SPTLSTEEKL 
TLFQLITEKV GGNANIIAGT GSYSTKETLE LTKKAEEVGV HGIMLVTPYY NKPTQGDLYK
HFKTIAQKTS LPIMLYNVPK RTGVDMSQDT ILKLAEIDNI IALKEASGDF NKIANVIRET
RGEFDVYSGD DISLMPVLSL GGTGVVSVAS HLIGKELKEI IDAYHANNSR KALELFQEIY
PFITALLVKT NPIPIKAAVN THLMQVGSVR PPLYDLSEKE LEQLSEVYKW SVGKY