| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1455 |
|---|
| Symbol | |
|---|
| ID | 6316899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1524098 |
|---|
| End bp | 1525366 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642643835 |
|---|
| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
|---|
| Protein accession | YP_001917626 |
|---|
| Protein GI | 188586081 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3344] Retron-type reverse transcriptase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.170778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.343243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAT GGTACAGTTT AATAGACAAG ATTTATTCCA AAAAGAATCT AGAAGACGCC
TACCGCAGGG TCAGAGCTAA CAAAGGTAAA CCCGGCATAG ACCAGGTAAC CGTGGAGGCT
TATGGCTCCA ACCTAGAAGA AAATCTGGAA ACCCTTCATC ATGACCTTAA AATTGGCGCA
TACAAACCAC AACCTGTGAG GCGAGTTAAG ATACCCAAAC CAGATGGAAG TACTCGCCCA
TTAGGGATTC CAACCGTAAA AGACAGGGTA GTCCAACAAG CAACGTTAAA TATACTTCAA
CCGATTTTTG ATCCAGACTT CCACCCGTCA AGCTACGGAT ACAGGCCTAA TCGCTCATGT
CACAAAGCAA TAGCTAAATC AGAACAGTTC ATTAATAAAT ACAATCTAAG ACATGTAGTA
GATATGGACC TATCTAAATG CTTTGATAAA TTAAACCATG AGTTGATTAT CGAAGAAGTA
GCCAAGAAAG TTAGTGATGG AAGTGTTCTC AAATTAATAA AGAAATTTTT GAAGTCCGGA
GTAATGGAAG ATGGAGCCAT AGAAGACACA GAAATAGGGA GCCCTCAAGG TGGAGTGATT
TCACCACTAC TAACCAACAT TTACCTAGAC AGATTTGATA AAGAAATGAA GAGTCGCAAT
ATCCGAATAG TAAGATATGC CGATGATATT TTAATATTCG CCTACACACC AAGACAAGCG
AAAAGATATA AAGATATAGC TACTGAAATA TTAGAAGACG AATTAAAACT AACAGTTAAT
AAAGAGAAAA CTCACATAAC AAATGACCGC AAAGGTGTTC CCTACCTAGG AGTTATCATA
AGGAGTCAAA ACATATCCAT CCAGCCTGAA AAGATACAGA AATTCAAAGA AAAAGTCAGA
ACTCTTACAC CAAGAAATCA TGGTAGAAAT CTATCCGAAA TCATAAAAGA GCTAAATCCA
GTATTAAGAG GATGGGCAAA TTACTTCCGA ATAGCCAATT GTAAGAAACA ATTTGAGAAC
TTAATGAAAT GGATTAGAAG AAGACTTAGG ATGAAGAAAA TGCGAGAATG GAAAAGTTGG
AAACAACTAC ACAAAACTCT TCGCAGAAAA GGCTACAAAG GGGAATTTGA GAAAATCTCC
ATGAATAAAT GGAGAAACTC ATCAAGTCCT CTCATAAGTT TAGCACTACC CAATAAGTGG
TTTGACGAGA TAGGTCTAAT TAATATTAGT ACCTATCAAG TTGGTATTTT GCATCACTTT
AGAAAGTGA
|
|---|
| Protein sequence | MKKWYSLIDK IYSKKNLEDA YRRVRANKGK PGIDQVTVEA YGSNLEENLE TLHHDLKIGA
YKPQPVRRVK IPKPDGSTRP LGIPTVKDRV VQQATLNILQ PIFDPDFHPS SYGYRPNRSC
HKAIAKSEQF INKYNLRHVV DMDLSKCFDK LNHELIIEEV AKKVSDGSVL KLIKKFLKSG
VMEDGAIEDT EIGSPQGGVI SPLLTNIYLD RFDKEMKSRN IRIVRYADDI LIFAYTPRQA
KRYKDIATEI LEDELKLTVN KEKTHITNDR KGVPYLGVII RSQNISIQPE KIQKFKEKVR
TLTPRNHGRN LSEIIKELNP VLRGWANYFR IANCKKQFEN LMKWIRRRLR MKKMREWKSW
KQLHKTLRRK GYKGEFEKIS MNKWRNSSSP LISLALPNKW FDEIGLINIS TYQVGILHHF
RK
|
|---|
| |