| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1451 |
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| Symbol | |
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| ID | 6316895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1519299 |
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| End bp | 1520312 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642643831 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001917622 |
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| Protein GI | 188586077 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02873] probable sporulation protein, polysaccharide deacetylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.708112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.175155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTAATA AAATTTCTTT TAAAGTTTTA AAAATGAAAA AATTTTTTGT ACTTGGTCTA
ATAGTCCTTA TAGTATTACT GGCATTATTA GTAATAGCTT ATGACGGTAT TGATGTCGAT
TTATCTACAA AAGATGCTCA ACGTGTTAAC CCAGGAGTGG AGTTTTTAGG AGAAGATTTA
AGTGACCTGA CAAAGGAAGA GGTATTTACA ATAGTATCTA AATACCAAGA AGATTTGTAT
CAAGAAGGTG AAGATGCCTA CCTGGACCCG GTTACCAAGG GGGTTATCCC TGGATTGCCT
GGAAAAGAAC TAGATGTAGA GAATACTGTA GAAAACATTA TGCTGGCAGA CAGTGAAACA
ACTGTACCAC CTCAATTGAG CACAATTCCT CCAGATAAAA CTATTCAAGA TTATCAAGAT
GCTCCTATTT ATCAGGGAAA TCCCAAAAAA GATTATGCTG CTTTTATCTG CAATGTAGCA
TGGGGAACAG AATATATCGA TGAGCTATTA AACTTATTAG AGGAACATCA AGTCAGGATT
TCTTTTTTCT TAGAAGGACG CTGGGCTGCC AATAATCCAG ATAAAGTTGA ACAAATACAT
GAATACGGGC ATGAGATCGG TAATCACGGT TACAGTCATT ATATGATGAG TGATTTAAAT
AGAGATAAGA TTAGAGAAGA AATTGAAAAA ACTAATCAGG AAATTTCTGA AATAACTGGC
ACAAAAGCTG AACTATTTGG CCCACCTGCA GGTGACTTTG ATGAAGATGT TTTACGCGTT
GCTAGTAATT TAGATATGTA TACAATTCTT TGGTCCCTTG ATACCATCGA TTGGAAAGAA
CCTGGGGTAG ATTATATGAC GGATAAAATT TTAAACAATA TCCATCCTGG TGCCATTATA
TTAATGCACC CAACTGAGGA TACCGTTACA GCACTAGATG AAATTCTCAC AGGATTGGAA
TCAAAAGAAT ATGAGGTGTT ACCTGTATCT CAATTGATTA AAAACTATCA ATAA
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| Protein sequence | MFNKISFKVL KMKKFFVLGL IVLIVLLALL VIAYDGIDVD LSTKDAQRVN PGVEFLGEDL
SDLTKEEVFT IVSKYQEDLY QEGEDAYLDP VTKGVIPGLP GKELDVENTV ENIMLADSET
TVPPQLSTIP PDKTIQDYQD APIYQGNPKK DYAAFICNVA WGTEYIDELL NLLEEHQVRI
SFFLEGRWAA NNPDKVEQIH EYGHEIGNHG YSHYMMSDLN RDKIREEIEK TNQEISEITG
TKAELFGPPA GDFDEDVLRV ASNLDMYTIL WSLDTIDWKE PGVDYMTDKI LNNIHPGAII
LMHPTEDTVT ALDEILTGLE SKEYEVLPVS QLIKNYQ
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