| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1447 |
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| Symbol | |
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| ID | 6316891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1514664 |
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| End bp | 1515563 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642643827 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001917618 |
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| Protein GI | 188586073 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000785982 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.274975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTAGGAT TCCTTACTGT TTGTAAAACC CCGGGCTATA CTTCTCATGA TGTAGTTCAA
TATTTAAGGA AAAATTATCA AGTAAAAAAA GTAGGGCATT TGGGTACTTT AGATCCAGGA
GCTGTAGGTG TGCTACCTCT TGCCTTGGGG AAAGCTACGC GCTTTTCTCA ATATATATTA
TCCCAGGACA AGAAGTATAG ATTTGAGTTA ACTTTAGGTG AAGCTACTGA TACTTTGGAC
GCCCAAGGTA AAACAATTGA AAAAGATGAA GTCCAGAATA CTCATATTGA AAATTTAAAA
AACAAGTATC AAGAGCTTAT CGGAAATATA AATCAGGTTC CACCAATGTA TTCTGCAATT
AAACAAAAAG GCAAAAAACT TTATGAACTA GCTCGAGAAG GGAAAGAGGT TGAACGAACC
CCTAGACAAG TCACGATTCA CTCTTTAAAC TTAGTCGATA TTTATGAACA CCAGGGAAAA
CATAGATTTC TTTTTGATGT TCATTGTTCA AAGGGAACTT ACATTAGAAC TTTAGCAGAA
GACTTGGCTA AGCTGTCAGG AACCGTGGGG TATATGTCTT TTTTAATCAG AACAGCTACA
GGCATATTTA ATTTAGATGA TGCCATATTT CCTCAAGAGC TCCCTGAACA AAAAACTGAT
CTGGGCATTC ATTTATTTCC TGTGGATTAT CCCTTGTCAG ATATCCCCTC TCTGGTTTTA
AAAGAATCTC AGCAATTGAA ACGGTTTAAA AATGGAAACT TTGTTAATAC TGCAGTTATA
GCTGAATCAG GAGAACTTTA TAGGATATAT GAAGAAGATA GCTCAGGTGA TAATTTATTT
TTAGGATTAG GTAAAATCAC GTCCAGTAAT ACTTTAAAAC CTGAAAAAAT TATAGCTTAA
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| Protein sequence | MLGFLTVCKT PGYTSHDVVQ YLRKNYQVKK VGHLGTLDPG AVGVLPLALG KATRFSQYIL
SQDKKYRFEL TLGEATDTLD AQGKTIEKDE VQNTHIENLK NKYQELIGNI NQVPPMYSAI
KQKGKKLYEL AREGKEVERT PRQVTIHSLN LVDIYEHQGK HRFLFDVHCS KGTYIRTLAE
DLAKLSGTVG YMSFLIRTAT GIFNLDDAIF PQELPEQKTD LGIHLFPVDY PLSDIPSLVL
KESQQLKRFK NGNFVNTAVI AESGELYRIY EEDSSGDNLF LGLGKITSSN TLKPEKIIA
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