Gene Nther_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1438 
Symbol 
ID6314861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1504435 
End bp1505076 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content38% 
IMG OID642643818 
Productglycosyl transferase family 2 
Protein accessionYP_001917609 
Protein GI188586064 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.192606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0852028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGAAA CAGTAGCGAT AATACCGGCA TATAACGAAG AGAGTACTAT CGGTAATGTA 
TTATCAGTGC TAAATAACAG TAGAGTGATT GATCAAACCG TTGTTGTTAG TGATGGTTCT
ACAGATAACA CAGTTCAAGT CTCTAGAGAG TTTGGGGCTA ATGTCATAGA ATTAGAAGAA
AATGTTGGCA AGGGTGGAGC CATGAAGGCG GGCCTTGACA ATATTACTGC CGATATTATC
CTCTTCTTAG ATGCCGATCT GATTGGTTTG ACCTCGATAC ATATTGAAGC ACTGCTACTC
CCTGTTATTA ATAACGAAGC TGATATGACT GTAGGTATCT TCGAAAAAGG TCGAATTGCC
ACTGATTTTG CCCAAAAGGT GGCACCTTAT CTATCTGGAC AAAGAGCTGT TGCCAAGAAA
GTTTTGACAG ACATTTCAGA TATAAATATG TCTAGATTTG GAGTAGAGGT GGCCTTGAAT
CGTCATATTG AAGAAAATAA CATTAGAGTT AAAGAAGTGA TTTTGCAAGA TGTCAGTCAT
GTTATGAAAG AGGAGAAATT TGGTGTTCTG CGAGGTTTTG CAGCCAGGAT GAAAATGTAC
TGGGAAATTG TTAAGTATTT TGCCAAAAAA GAAGTTAAAT AA
 
Protein sequence
MNETVAIIPA YNEESTIGNV LSVLNNSRVI DQTVVVSDGS TDNTVQVSRE FGANVIELEE 
NVGKGGAMKA GLDNITADII LFLDADLIGL TSIHIEALLL PVINNEADMT VGIFEKGRIA
TDFAQKVAPY LSGQRAVAKK VLTDISDINM SRFGVEVALN RHIEENNIRV KEVILQDVSH
VMKEEKFGVL RGFAARMKMY WEIVKYFAKK EVK