| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1435 |
|---|
| Symbol | |
|---|
| ID | 6314858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1501107 |
|---|
| End bp | 1502267 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642643815 |
|---|
| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| Protein accession | YP_001917606 |
|---|
| Protein GI | 188586061 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.675694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0373934 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA AAAATATTAG TATTTTAGGA TCTACTGGCT CTATTGGAAC ACAAACTTTG
GAAATAGTGG AGAATAATCC TGATAAATAC AATGTAGTAG CTTTGACTAC TAATTCTAAT
ATTGATACTC TAATTAATCA AGCTAAAAAA TTTCACCCAA ATTTATTGGT AGTTAATGAT
AGTTCTTTGA AAGATGAATT ATGGAATAAA CTTAAGGAAG AAAATTTAAA CAATATAAAA
ATCGCTTCTG GACAGGAAGG TATGATCCAA GCTGGAGAAA TGGCAGAGGC TGAATTAGTA
GTTGTTTCTG TAGTAGGTTT TAGTGGTGTA ATCCCCACAA TATCTGCATT GAAGGCCGAT
AAAGATGTTG CTTTGGCGAA TAAAGAGACC CTTGTAGCTG CCGGAGAACA GGTGATGCGA
TTAAGCCACC AATCAAAAGG ACGCTTACTT CCAATAGACA GTGAACACTC GGCTATATTT
CAAGCTCTTA TGGGTGAAAA AAATGATTCT GTAAATAAAT TGATTTTAAC AGCTTCAGGG
GGACCTTTTT TCGGTAAAAC AAAAGAAGAA TTATATAACA TTTCTCCTAA AGACGCTTTA
AAGCACCCTA ATTGGGATAT GGGGAACAAA ATAAGTATAG ACTCAGCAAC TTTAATGAAC
AAAGGATTGG AAGTGATAGA AGCTCACTGG TTATTTAATA TACCTTTTGA ACAAATAGAT
GTTGTGATTC ACCCCCAGTC TATAGTTCAT TCCTTAGTTG AGTTTGTGGA CGGTGCAATG
AAGGCAGAAT TGGGATTACC CGATATGAGA ATTCCGATAC AATTCGCTCT CGGATATCCT
CAAAGGGAAG CCAATAATTT TGAACGATTA GATCTAACGG ATTTTGATTT GACATTTAAA
AAACCTGATA CTAAAACATT TCCCTGTTTA TCACTGGCTT ATCAGGCTGG AAAAATTGGA
GGATCTATGC CTTGTGTTTT AAACGCAGCT AACGAGCAGG CAGTTTATCA ATTTTTAGCT
AAAAAGATCA CTTTTTTACA AATCCCGGAA TTAATTGAAA AGGTTATGGA GAAACATGAG
GTAATAAAGA ATCCTTCCAT TGAGAACTTA ATCTCAGTAG ATAATTGGGC AAGAAAAGCT
ACTGATGAAA ATATAACTTA G
|
|---|
| Protein sequence | MFEKNISILG STGSIGTQTL EIVENNPDKY NVVALTTNSN IDTLINQAKK FHPNLLVVND
SSLKDELWNK LKEENLNNIK IASGQEGMIQ AGEMAEAELV VVSVVGFSGV IPTISALKAD
KDVALANKET LVAAGEQVMR LSHQSKGRLL PIDSEHSAIF QALMGEKNDS VNKLILTASG
GPFFGKTKEE LYNISPKDAL KHPNWDMGNK ISIDSATLMN KGLEVIEAHW LFNIPFEQID
VVIHPQSIVH SLVEFVDGAM KAELGLPDMR IPIQFALGYP QREANNFERL DLTDFDLTFK
KPDTKTFPCL SLAYQAGKIG GSMPCVLNAA NEQAVYQFLA KKITFLQIPE LIEKVMEKHE
VIKNPSIENL ISVDNWARKA TDENIT
|
|---|
| |