| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1433 |
|---|
| Symbol | |
|---|
| ID | 6314562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1499421 |
|---|
| End bp | 1500164 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642643813 |
|---|
| Product | Undecaprenyl pyrophosphate synthetase |
|---|
| Protein accession | YP_001917604 |
|---|
| Protein GI | 188586059 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0476223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.0410509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAGAGCT TGCAAACTTA TTTAAATAAA ATAGATTATC AAAATGTACC CCGACATATA
GCAATTATTA TGGATGGCAA TGGAAGATGG GCTAAGTCCC GTGCTCTACC GAGGATAGCT
GGTCACAGGG CTGGAGTCGA AGCCATCAAA AGAGTATCGG AAATTAGTCA AGAAATAGGA
ATAGAAATTA TTACTATGTT CGCCTTTTCC ACAGAAAATT GGAAAAGACC TAAAAAAGAA
GTAGAATTTT TAATGTCACT TCCAAAAGAA TATCTCAAAA AAGAACTACA AAATTTAAAA
GAAAATAATA TAAAAATAAC TATTATGGGC GATACTAGTG CTATTCCTGC TAAAACATTA
GAGGTGATTG AACAAGGGGT TGAAGAAACT AAAAATAATA CAGCTTTAAA TTTGAATTTT
GCGCTAAATT ATGGAGGAAG AGCGGAAATA GTACAGGCAG TCAGGAAAAT AGCCGCTAAA
GCATCTGATC GGGAAATTGA CCCTAAAACT ATTTCTGAAG ATATTATTTC GCAACATCTG
TATAACCCTG AAATACCAGA TCCAGATTTA ATGATACGTT CTAGTGGTGA GCAAAGATTA
AGTAATTTTT TATTATGGCA ACTTGCTTAT TCCGAACTCT GGTTTCCAGA AGTTTATTGG
CCAGACTTTC AAAAAGAGCA TTTATTACAA GCCGTATTAG CTTATCAAAA TAGAGAACGA
AAATTTGGCG GAGTAAATTC CTAG
|
|---|
| Protein sequence | MESLQTYLNK IDYQNVPRHI AIIMDGNGRW AKSRALPRIA GHRAGVEAIK RVSEISQEIG
IEIITMFAFS TENWKRPKKE VEFLMSLPKE YLKKELQNLK ENNIKITIMG DTSAIPAKTL
EVIEQGVEET KNNTALNLNF ALNYGGRAEI VQAVRKIAAK ASDREIDPKT ISEDIISQHL
YNPEIPDPDL MIRSSGEQRL SNFLLWQLAY SELWFPEVYW PDFQKEHLLQ AVLAYQNRER
KFGGVNS
|
|---|
| |