Gene Nther_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1412 
Symbol 
ID6315012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1480618 
End bp1481709 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content36% 
IMG OID642643792 
Productflagellar biosynthetic protein FlhB 
Protein accessionYP_001917583 
Protein GI188586038 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB
[TIGR00789] flhB C-terminus-related protein
[TIGR01404] type III secretion protein, YscU/HrpY family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.342211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.890154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACATAG ATAAAAGATT TGATTTACAA CTTTTTAATC AAGAAAAAAC TGAAACACCT 
ACTCCCAAAC ATAGGAGAGA ATCAAGAAAA AAAGGACAGG TTGCGAAAAG CACGGAATTA
ACATCAGCAT TACTTCTTAT GGCAACCTTT TCTACCCTAT ATATTGTTTT CCCTTACTCC
TTTGATCGTT TTATGAATTT TGCCAAACAG TTCTGGTCTA ATATAAATAC TATCAATTAC
ACTATGGACG AGATCCATTC TCTGTTGATA ACGATGATGA TGGAAGGCGC GGTATTTGCA
GCCCCAGTGA TAATTGTGGC AGTACTTATT GGTCTGATCA GTAATTTGAT GCAAGTAGGA
ATCTTATTGA CTGGTGATCC TTTAAAACCT AAATTAGAGC GATTAGACCC TATTAAAGGT
TTCCAAAAAA TCTTTAGCAA GCGAGCTGTA GTTGAGCTTA CAAAATCATT GTTTAAAATG
GTAGTTATAG GTATTATAGC GTATATTCTC TTTAATAACC ATATGGAACA TTTTCCCTAT
TTTTATGATA TGACAGTAAT GCAAATTGCG GTAGAAGTAG GTCAATTGAC CTGGGCTTTG
ATATTTCGTG TCGGAATGGC ATTACTGTTT TTAAGTATAT TAGATTATGT CTATCAAGTA
TGGGAACATG AGCAAAATCT AAAAATGACT AAACAACAAG TAAAAGACGA GCACAAACAA
ACCGAAGGGG ATCCCCAAGT ACGGTCCAAG ATGAAAGAAA AGCAAAGGGA AATTTCTAAA
AAAAGAATGA TGAGTGAAGT TCCTGAAGCC GATGTTGTCA TAACAAACCC CGTTCATATA
GCTGTTGCAT TAAAGTATGA TGAAGGGGAT ACTGCTCCCA TGGTACTAGC AAAGGGCCAG
GGACATGTGG CTAGAAAAAT CAAAGAAATA GCTGAAGACC ATAATGTAGT AGTAATGGAA
AACCGTCAGT TAGCTAGAAG CTTATATTTT TCTGTTGAAA TTGGGGACTT TATTCCAGAA
GAGTTATATC AAGCAGTTGC GGAAGTACTA GCCTTTGTCT ATAGGTTAAA AAAATCATCA
GGCATGGAGT GA
 
Protein sequence
MNIDKRFDLQ LFNQEKTETP TPKHRRESRK KGQVAKSTEL TSALLLMATF STLYIVFPYS 
FDRFMNFAKQ FWSNINTINY TMDEIHSLLI TMMMEGAVFA APVIIVAVLI GLISNLMQVG
ILLTGDPLKP KLERLDPIKG FQKIFSKRAV VELTKSLFKM VVIGIIAYIL FNNHMEHFPY
FYDMTVMQIA VEVGQLTWAL IFRVGMALLF LSILDYVYQV WEHEQNLKMT KQQVKDEHKQ
TEGDPQVRSK MKEKQREISK KRMMSEVPEA DVVITNPVHI AVALKYDEGD TAPMVLAKGQ
GHVARKIKEI AEDHNVVVME NRQLARSLYF SVEIGDFIPE ELYQAVAEVL AFVYRLKKSS
GME