Gene Nther_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1393 
Symbol 
ID6314610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1465287 
End bp1466054 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content39% 
IMG OID642643773 
ProductH+transporting two-sector ATPase E subunit 
Protein accessionYP_001917564 
Protein GI188586019 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.800727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTAAAA TATATAAGTC TAAAAACTTG ACTCCCAAAT CCCCTCTTGT CTGGAAATGT 
GACCATTTCT TCTCTGATAC ACAAGAAGAT ACATATATGG AGGAAGAACA ATTCGAGACA
GAAGAAGAAG AGCAACAGCA AGGACATCAA ATTCCCGAAG AAGAGATTAA TCAAATTCTA
GAAAACGCTC GACAAAAGGC TGAACAGGAA GCCCAGGAGA TAATAGATAA TGCTCAGGCT
GAAAAAGAAA AAATACTTAA AGAAGCCAAG GAAAAAGGTT ATCAAGATGG GTACCAGCAA
GGCAAAGATG AGGGGTTACA GGAAGTTGAA GCTGAAAAAG AACAGTTAAT ATCCGAAGCT
AAGCATCTTT TAGTGGCTGC TAAGCAAGAT TATCAAGACA CATTAAAAGA ACTAGAACCG
GAAATTTGCC GCTTGATAAC TGAAATTGCC GAGAAACTTA TATCCGATAG ACTAGAAGAC
CAGCAAGAAC TAGTATCTGA ACTGGTAAAA AATGGTATTG AAAGAATGAC TGAACAAAAT
AAGGTTATAA TAAGAGCACA TCCCGATGAT TATGCCCAAT TAGAAGCAGA CAAAGACCAA
ATACTCGAGG GTTTTTCTGA CTTAAGGATT GAACTGAAAC AGGACGATGA TTTAAAGCCA
GGAGCACCAA TTTTGTTTGG GGAAAATGGA CATATTGAAC TAGAACTAAG TCGGCAAATA
GATGAACTTC GCCGAGCCTT GGGGCAGGTG ATTAACAGTG GCAACTGA
 
Protein sequence
MSKIYKSKNL TPKSPLVWKC DHFFSDTQED TYMEEEQFET EEEEQQQGHQ IPEEEINQIL 
ENARQKAEQE AQEIIDNAQA EKEKILKEAK EKGYQDGYQQ GKDEGLQEVE AEKEQLISEA
KHLLVAAKQD YQDTLKELEP EICRLITEIA EKLISDRLED QQELVSELVK NGIERMTEQN
KVIIRAHPDD YAQLEADKDQ ILEGFSDLRI ELKQDDDLKP GAPILFGENG HIELELSRQI
DELRRALGQV INSGN