| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1386 |
|---|
| Symbol | |
|---|
| ID | 6316639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1458449 |
|---|
| End bp | 1459234 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642643766 |
|---|
| Product | transcriptional repressor CodY |
|---|
| Protein accession | YP_001917557 |
|---|
| Protein GI | 188586012 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4465] Pleiotropic transcriptional repressor |
|---|
| TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000062677 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 0.893187 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGTA GTTTGTTAGA AAAAACACGC AGAATCAACA GAATTCTACA AAAGGCTGCA
GGACAGCCTG TAGATTTCGC GGAAGTAGCC CAAGTTTTAA GGGATGTTAT CGAAGCAAAC
ACTTACATTG CCAGCAAGAA AGGTAAAATA TTGGGTAGTG CCCTGGTAGA TGAATTCGAG
TGTGAGATTA TGAAAGATCA AGTTCTTGAT CAAGGAAAAT TCCCTGAGGA TTACAATGAT
TATTTATTAT CATTAAATGA AACTAGTTAT AATCTAACAC AAAAAAGAAA CGAATGTGTG
TATAAAAATG ACGAACAATG TCTATTTGAA AACAAATTAA CAACAGTAGT CCCGATAATC
GGGGGAGGAA AGAGACTTGG CTCCTTGATT TTAGCTCGTT TCAGTAAAGA ATTTCAAGAC
GAAGACTTAA TACTAGCAGA GAATGGAGCT ACAGTAGTTG GCATGGAAAT ATTAAGGGCA
AAAGCCGAGG AAATTGAAGA AGAAGCTCGA AATAAAGCTA TTGTTCAATT AGCCTTAGGA
ACTCTATCAT ATTCTGAGCT GGAAGCTGTA GAGCACATTT TTGAAGAGTT AGACGGTGAC
GAAGGTCTAT TAGTAGCAAG TAAGGTTGCA GATCGTGTCG GAATTACCCG ATCTGTAATT
GTGAATGCCT TGAGAAAGTT TGAAAGTGCA GGAGTTATTG AATCTCGTTC CTTGGGAATG
AAGGGAACTT ATATTAAAGT TCTCAACAAT CAATTGCTAG AAGAGCTTAG AAAAAGATAT
GCCTAA
|
|---|
| Protein sequence | MSSSLLEKTR RINRILQKAA GQPVDFAEVA QVLRDVIEAN TYIASKKGKI LGSALVDEFE
CEIMKDQVLD QGKFPEDYND YLLSLNETSY NLTQKRNECV YKNDEQCLFE NKLTTVVPII
GGGKRLGSLI LARFSKEFQD EDLILAENGA TVVGMEILRA KAEEIEEEAR NKAIVQLALG
TLSYSELEAV EHIFEELDGD EGLLVASKVA DRVGITRSVI VNALRKFESA GVIESRSLGM
KGTYIKVLNN QLLEELRKRY A
|
|---|
| |