| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1371 |
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| Symbol | |
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| ID | 6315684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1442644 |
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| End bp | 1443183 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642643751 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_001917542 |
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| Protein GI | 188585997 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000034435 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.381877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACCCTG AATTAGATCT TGTTTATGTA GGGAAAATTG TAGGTACTCA CGGTGTAAAA
GGTGAGTTGA AAGTCATTTC ACTCACCGAT ATTGAAAACC GATTTAATGA GCTAGATAGG
GTCTATCTTG TCAATGAACA AGATCACTAT GACCCTATTA TTGCTCATAT TGAATCATCC
TTTACTCATA AAAACATGGA AATTGTCAAG TTTAGTGAAT GGGATGATAT CAATCAAGTT
GAGGGTTTTC ATGACTGGTA TATTAAAATC CCTAGGGAAG AAAGGCCACA GTTAGAAGAA
GATGAATATT ACTTTGATCA AATCACCGGT TTGTCTGTTG TTACCGTGGA AGATGAATTT
CTGGGTACTG TAACCAATAT TTACCAAACT GGGAGTAACG ATGTCTACGA AGTCAGTAAA
GAACAAGATG ATAAGCCAAT TTTAATTCCA GCCCTTTATG AAGTAGTTAA AAAAATAGAT
CTTGACGAAC AAATTATGAT AGTGGATCTA CCAGAGGGGC TCTTAGACGA GGAGGAATAA
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| Protein sequence | MHPELDLVYV GKIVGTHGVK GELKVISLTD IENRFNELDR VYLVNEQDHY DPIIAHIESS
FTHKNMEIVK FSEWDDINQV EGFHDWYIKI PREERPQLEE DEYYFDQITG LSVVTVEDEF
LGTVTNIYQT GSNDVYEVSK EQDDKPILIP ALYEVVKKID LDEQIMIVDL PEGLLDEEE
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