Gene Nther_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1360 
Symbol 
ID6314534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1432079 
End bp1432810 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content36% 
IMG OID642643740 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001917531 
Protein GI188585986 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000468393 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0479743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA TTGCTGTTAT TACTGGCGGT TCTAGGGGTA TAGGTAGAAG TGTTACACTA 
AACTTAGCAA AAGCTGGGTA TGATGTTTTA ATTAATTATT CTTCTAACTC CAGTGCTTGC
CAAGAAGTTA AAAAGGAAGT TGAAGCTATT GGACAACGGG CCGAATGTTA TCAGGCCGCT
GTAGAGAATT ATCAAGATGT TGAAGCAATG GGTAATTATG CTATGGAAAA ATACGGAAAT
ATAAATGTAT TGGTCAATAA TGCAGGGATT ACTCAAGATA AACTTTTTCT GAGAATGAAA
GAACAAGATT TTGAAAAAGT GATTGATGTG AATCTTAAAG GTGTTTATAA TTGTAGTAAA
GTGTTTTCAA AACCTATGAT CAAAAATAGA TCAGGTACAA TAATTAATAT GGCATCTATT
GCTGGGATCA TAGGAAATGC AGGCCAAGCA AATTATTCAG CCAGTAAAGC TGGTGTCATA
GGTTTAACGA AAACTTTAGC ACGTGAATTA GCACCAAGGG GAGTTAGAGT TAATGCTGTC
GCTCCTGGCT TTATAGATAC AGAGATGACT GAGAACCTAT CGGAACAAGT AAAAGAGGAG
TTATTAAATC AAATACCTAT GAAGAGATAT GGTTGCCCTG AAGAAGTGGC TGAAACTGTA
CTATTTTTAA CTGAACAGGC TACATATTTG ACTGGACAAG TGATTAATGT AGATGGTGGT
ATGGTGATGT GA
 
Protein sequence
MSKIAVITGG SRGIGRSVTL NLAKAGYDVL INYSSNSSAC QEVKKEVEAI GQRAECYQAA 
VENYQDVEAM GNYAMEKYGN INVLVNNAGI TQDKLFLRMK EQDFEKVIDV NLKGVYNCSK
VFSKPMIKNR SGTIINMASI AGIIGNAGQA NYSASKAGVI GLTKTLAREL APRGVRVNAV
APGFIDTEMT ENLSEQVKEE LLNQIPMKRY GCPEEVAETV LFLTEQATYL TGQVINVDGG
MVM