| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1356 |
|---|
| Symbol | |
|---|
| ID | 6315605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1428143 |
|---|
| End bp | 1429168 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642643736 |
|---|
| Product | fatty acid/phospholipid synthesis protein PlsX |
|---|
| Protein accession | YP_001917527 |
|---|
| Protein GI | 188585982 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000000676172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0340376 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGAG TAGCTTTAGA TGCTATGGGT GGAGATCATG CCCCAAAAGC GCCTGTGAAA
GGTGCTTTGT TAGCTGTACA AGAGTTACAA GAAATTTCGA TTTCTCTTGT CGGTCAAAAA
GAATTAATTG AACAAGAACT TTCTCGAATA AAAAGCGAAG ATTTTGATGA TGATAACATA
CATATAGTTG ATGCACGGGA AATAATATCA GGTGAAGACA ATCCAACTCA AGCAATTAGA
GAAAAAAAAG ACTCCTCCTT AGTAAAGGCC ATGAACTTAT TAAAAGATAA TCAAGTAGAA
GCTGTAGTTA GTGCTGGAAA TACCGGGGCG TTTATGGCTG GAGGGTTGCT CAAACTCGGA
AGACTAGCAA ATATCAAAAG GCCTGCTTTA GCACCTGTTT TTCCAGCTTT TGATGGAAAT
GGGACTGTTG TATTAGACGT TGGTGCTACT ATGGATCCTA AACCAGAACA CTTAAAAGAT
TTTGCAATTA TGGGAAGTGT TTATGCAGAA AAAGTACTTG GTCGTGAACG ACCACGGGTG
GGACTAATAA ATGTAGGTGA AGAAGCAGGT AAAGGTAATC AACTTACTAA GGAAAGCTAT
AGTTTATTAG AGACTGCTCC TATTAACTTT TGTGGTAATG TGGAAGCCAG GGAATTGTTA
TCAGGTGATT TTGATGTGGT TGTATGTGAA GGTTTTATGG GAAATGTACT TCTCAAATTT
ATGGAAGGCA TAGGAAAAGG ACTTTTTGGG ACAATGAAAG ACGAATTTAC TGCGGATTTT
AAGAGTAAAC TTGGAGCTTG GATGTTAAAA CCTCGTATGA AGTCTCTTAA AAGTAGATTT
GATTACAATG AGTATGGAGG AGCACCTTTT CTAGGAGTGA ACGGAATTCT TGTGAAAAGT
CACGGTTCCT CCAATGAAAC CGCCATTAAA AATGCTATTG TGCGCCAAGT ATATCATTTT
GTCAATAACG AAGTTTTGAC GGCTTTTTCA CAGGAAATAG AGAAAGGGGT AGAAACTGAT
GAGTAA
|
|---|
| Protein sequence | MIRVALDAMG GDHAPKAPVK GALLAVQELQ EISISLVGQK ELIEQELSRI KSEDFDDDNI
HIVDAREIIS GEDNPTQAIR EKKDSSLVKA MNLLKDNQVE AVVSAGNTGA FMAGGLLKLG
RLANIKRPAL APVFPAFDGN GTVVLDVGAT MDPKPEHLKD FAIMGSVYAE KVLGRERPRV
GLINVGEEAG KGNQLTKESY SLLETAPINF CGNVEARELL SGDFDVVVCE GFMGNVLLKF
MEGIGKGLFG TMKDEFTADF KSKLGAWMLK PRMKSLKSRF DYNEYGGAPF LGVNGILVKS
HGSSNETAIK NAIVRQVYHF VNNEVLTAFS QEIEKGVETD E
|
|---|
| |