| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1352 |
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| Symbol | |
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| ID | 6315601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1424823 |
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| End bp | 1425821 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642643732 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_001917523 |
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| Protein GI | 188585978 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000773296 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.189925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAACT CTAAATCACT CATTGCAAGA ATTTTACAAA CCTTTGCTGT AGTTGCCGTC
CTAATATTAT TACTAAGTCA GGTGACGCCA GATTATTATC TGGTACAACC AGGTACACCT
TTAGAGTTGA GTGAGGTTAT TGAAATAGAC AATGATAGCC AAAAATTTGG CAATTTGTTT
TTGACAACAG TGAATCAATC TCGCACCAGT GGAGTATCAT TTTTGTATGG ATTACTTAAT
CCCAATGCTG AATTACATGA AATAGAAGAA GTGATACCTC CGGAAATGGA TGTGGAAGAG
TATCGAGAGA TGATGCAGCA ACGCATGACG GACAGTCAAA ACATAGCAAA AACAGTTGCT
CTAGAAAATT TGGGTCATGA AATAGAATTT ACTGGAGAAG GTATAAAGGT ATTAGAGCTA
GCAGAGGATA GTCCTGCAGA AAACATTTTA AAAAAAGATG ATATTATCAC TAAAGTCAAC
GGAGAACCCA TATATTTAGC CGAAGAATTA GTCGGTTATA TAGAAAATCA TCCTATTGGT
GAAACTGTAG AATTGACAAT TGAACGAAAT AACCAAGAGG AGCTAAAAAC TGTAGAAACG
AAAGCTCATC CTGATAATCC GGATAATTCA TACTTGGGCG TTTTTATAAA AACTGTCAAA
TGGGAACCTA TACTACCAGT TGATATAAAT TTTGAAACAG GAGGTATTGG TGGTCCTTCA
GCAGGTTTGA TGTTTGTTTT AGAAATCATG AATCAGTTAA CTGAAGAAGA CTTAAGTCAA
GGGCGAGTAA TTGCAGGTAC AGGGGCGATA GATTTAGATG GTTCCGTTAA TGCGGTAGGA
GGAGTAAGAC ATAAAGTTCG AGCTGCAGAA GCCCAAGGCG CTACTTACTT CCTGGTTCCC
GAAAACAATT ATGAAGAAGC TCAACAAGGG GCCGAAGATA TCAAAGTTGT CAAAGTAACA
AATATTGAAG AAGTTCAAGA TTTTTTGGAA TCACTTTAA
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| Protein sequence | MTNSKSLIAR ILQTFAVVAV LILLLSQVTP DYYLVQPGTP LELSEVIEID NDSQKFGNLF
LTTVNQSRTS GVSFLYGLLN PNAELHEIEE VIPPEMDVEE YREMMQQRMT DSQNIAKTVA
LENLGHEIEF TGEGIKVLEL AEDSPAENIL KKDDIITKVN GEPIYLAEEL VGYIENHPIG
ETVELTIERN NQEELKTVET KAHPDNPDNS YLGVFIKTVK WEPILPVDIN FETGGIGGPS
AGLMFVLEIM NQLTEEDLSQ GRVIAGTGAI DLDGSVNAVG GVRHKVRAAE AQGATYFLVP
ENNYEEAQQG AEDIKVVKVT NIEEVQDFLE SL
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