Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1351 |
Symbol | |
ID | 6315600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1424049 |
End bp | 1424819 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642643731 |
Product | Patatin |
Protein accession | YP_001917522 |
Protein GI | 188585977 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.019632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.0919184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTAAAA AAATAGGTTT AGCTTTGAGC GCCGGCTCAG CCCGGGGCTT GGCTCATATA GGTGTTTTAA AAACATTAAT TGACAATAAT ATTCCAATTG ATTGCATTGC AGGAACCAGT ATGGGTAGTA TGGTAGGAGG TTTGTATGCT GCAGGGATAC CAATTGATAT TATCGAGGGC TTATCTTTAA ATTTAACACA AAAAAAATGG GTGGATATAG GTGTGCCTAG AAAGGGATTT ATTCGAGGTG ATAAAGTTTT ACAAATTCTG CGCATGTTAA CTAAAGACAG CGCTATTGAA AATACCAAAA TTCCCTTTGG TTGTGTGGCG ACTGAATTAA ACACTGGAGA ACGAATTGTT TACAAACAAG GGAATTTAGC GGAAGCTATC AGGGCAAGTA TTTCTATTCC GGGAGTTTTT ACTCCATACG AATACGAAGG AAAAACTCTA GTAGATGGGG CATTAGTAGA CCGACTACCT GTAAGTTTGT GTCGCGCTTT AGGAGCCGAT TGTGTAATTT CAGTAGATGT GAGTACCCAC GTGTCTAATG CTAGTATTAC TAATATATTT GATGTGATAG TCCAATCAAT GAATATAATG CAAGCTGAAA TGTTAAAAGA AAGAAGAGAA GATAGCGATA TTCTGATTAG GCCTGATGTA CAAAGTATTA CACCCAATCA ATTCCAAAAG GCAGAAGAAG CTATTGAAGC AGGCAAAGAA GCATGTCAGG AAGTTTTACC AGCTTTAAAA CAAGTAGTCG AGGAGTGTTA A
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Protein sequence | MTKKIGLALS AGSARGLAHI GVLKTLIDNN IPIDCIAGTS MGSMVGGLYA AGIPIDIIEG LSLNLTQKKW VDIGVPRKGF IRGDKVLQIL RMLTKDSAIE NTKIPFGCVA TELNTGERIV YKQGNLAEAI RASISIPGVF TPYEYEGKTL VDGALVDRLP VSLCRALGAD CVISVDVSTH VSNASITNIF DVIVQSMNIM QAEMLKERRE DSDILIRPDV QSITPNQFQK AEEAIEAGKE ACQEVLPALK QVVEEC
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