Gene Nther_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1346 
Symbol 
ID6315595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1420069 
End bp1420908 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content35% 
IMG OID642643726 
ProductdegV family protein 
Protein accessionYP_001917517 
Protein GI188585972 
COG category[S] Function unknown 
COG ID[COG1307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00762] EDD domain protein, DegV family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.22835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC ATATAGTAAC TGATAGTACA TGTGATTTAC CTAAAGAAAT AATAGAAAAA 
TATAGTATCA ATGTAGTACC CTTAAACGTT CATTTTGCGG AAAATACCTA TAAAGACAAG
ATTGACTTAT TTCCTGATGA ATTCTACCAA AAATTAGTGA ATTCACAGGA ACATCCCGAA
ACTTCTCAAC CTTCTCCAGG AGATTTTGTA AACTGTTATC AAGAAATTGC AGGGGAGAAG
GATCAAATAT TATCAATACA TTTGTCCTCA GAGCTTAGTG GCACATTTCA ATCAGCTAAT
ATTGCTAAGG AAATGCTACC TGATTTAGAT ATTACGGTGA TTGATTCTAA ATTGGCATCC
CTGGCTATGG GATTATTAGT CAAAAAGGCT GCAGAAGCAA GAGAGCAAGG AGCTTCTATG
GAAGAAATTG TCGACAAAAT TGATGTTTTG AAAGAAAAAA TTACCTTGTA TTTTTTTGTG
GATACTTTGG AATATTTAAA ACGAGGAGGC AGAATTGGTA AGGCTCAAGC CCTGGTAGGC
TCTCTTTTAG ATATCAAACC GATATTAACC ATTAATAATG AGGGAATCAT TGAACCCATT
GATAAAGTGA GAACAAAAAA GAAAGCAATA AACAAGGTAA TTGATCTATT AAAAGAAGCA
AAGGGAGACG TGAATGTAAC GGCGGGAATT CTTTATAGTG GTAATGAACA AGAAAATCTA
GATATGATTA AAACTAAAAT TAGCGAAGAA TTTAATTGTG AAGACATGGT GATTTCACCC
TTCGGACCTG TTATTGGAGT CCATGTTGGT CCAGGGGCCT TTGGAGTATG TATGATTTAA
 
Protein sequence
MTIHIVTDST CDLPKEIIEK YSINVVPLNV HFAENTYKDK IDLFPDEFYQ KLVNSQEHPE 
TSQPSPGDFV NCYQEIAGEK DQILSIHLSS ELSGTFQSAN IAKEMLPDLD ITVIDSKLAS
LAMGLLVKKA AEAREQGASM EEIVDKIDVL KEKITLYFFV DTLEYLKRGG RIGKAQALVG
SLLDIKPILT INNEGIIEPI DKVRTKKKAI NKVIDLLKEA KGDVNVTAGI LYSGNEQENL
DMIKTKISEE FNCEDMVISP FGPVIGVHVG PGAFGVCMI