| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1342 |
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| Symbol | |
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| ID | 6316560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1416587 |
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| End bp | 1417261 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642643722 |
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| Product | ribulose-5-phosphate 3-epimerase |
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| Protein accession | YP_001917513 |
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| Protein GI | 188585968 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.361236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGACAT TAGTGGCACC ATCAATATTA TCAGCTGATT TATTGAAGTT AGAAGAGCAG
ATCAAGGCTG TTGAAGCTGC TGGGGCAGAT ATGATTCACG TCGATGTAAT GGATGGACGA
TTCGTTCCCA ATATAACCAT GGGACCCAAA ATTGTTGAAG CCCTCAAGAG AATAACCTCT
ATTCCTTGTG ATGTACATTT GATGATTGAA GAACCGGAAA AGTATATCGA CAAATTCGCT
CAAGCAGGTG CCGATATATT GACTATTCAT CAGGAAGCTT CATTGCATTT GGACAGAAAT
ATAGAAGCAA TTACTGCACA TGATATTAAA GCTGGAGTTT CTTTAAACCC TGCTACACCT
TTAGAGCAAA TAAAGTGGGT ATTACCAAAA CTGGATCAGG TTTTATTGAT GAGTGTTAAT
CCTGGGTTTG GTGGACAAAA ATATATACCA TATGTATCAG GCAAAATAAG CGATTTGGAT
AAAATTCGAA AGGCGGGTAA ATATAGCTTT ATGATTCAAG TTGATGGAGG AATAAATCAC
AGTAATGCCA AACAGGTGCT GGACTCTGGT GCAGATATAC TGGTAGCAGG CTCTGCTATA
TTTTCATCCA AACTGGGGTT AGAACAAGCT ATTAAATTGT TAAAATACCC TTCCCCAGAT
CCAACTTCTA TTTAG
|
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| Protein sequence | MMTLVAPSIL SADLLKLEEQ IKAVEAAGAD MIHVDVMDGR FVPNITMGPK IVEALKRITS
IPCDVHLMIE EPEKYIDKFA QAGADILTIH QEASLHLDRN IEAITAHDIK AGVSLNPATP
LEQIKWVLPK LDQVLLMSVN PGFGGQKYIP YVSGKISDLD KIRKAGKYSF MIQVDGGINH
SNAKQVLDSG ADILVAGSAI FSSKLGLEQA IKLLKYPSPD PTSI
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