Gene Nther_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1340 
Symbol 
ID6316558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1413717 
End bp1415705 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content38% 
IMG OID642643720 
Productserine/threonine protein kinase with PASTA sensor(s) 
Protein accessionYP_001917511 
Protein GI188585966 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.458756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGAG AACTGTTAAT TAATCGATAT CAAATAGTAA TGCATGTTGG TACGGGAGGA 
ATGGCATCGG TTTATAAAGC TAAGGATCAA ATTTTAAACC GTTATGTTGC TATAAAAGTA
TTACTACCTC AATTTGCCCA CGATGAGGAG TTCATAAAAA AGTTTCGCAG AGAAGCTCAA
GCTGCTGCAA GCTTATCCCA TTTTAACGTT GTGAGTATTT ACGATGTAGG ACAAGATGGG
GATAGACATT TCATTGTAAT GGAATATATT GAGGGGAAAA GTCTGAAGGA AGTTATTATA
GAAAAAGCTC CGTTACCCGT AAACAAAGCG GTTGACATTG TCTGTCAAAT TTCTGATGCT
TTGATTCACG CCCATGCCAA CAATGTGGTT CATAGAGATA TAAAACCTCA TAATATTTTA
ATTACAACAG AGGGTAAGGC TAAGGTAACT GATTTTGGTA TAGCAAGAGC AGTATCCGAA
GCTACACAAA CCTATACTAG TTCTGTCATG GGCTCCGCCC ACTACTTTTC GCCGGAACAA
GCCAAAGGAA GTTATACTAG CGAACGTTCT GACATTTATT CGGTAGGTGT AGTTTTGTAT
GAAATGCTAA CTGGTAATGT TCCTTTCAAT GGCGGTAGTC CTGTATCTGT AGCCTTAAAG
CATATTCAAG AAATGCCTGA AAAACCTACA AATTATAATC CTGATATACC TCAAGAGCTT
GAACGTGTGA TAATGCGTGC TCTAGAAAAA GATCAAGCTT TTAGATATCA AAATGTGAAA
GATTTGATGG ATGACTTGAG AAACTTTGTC GACAATCCCA CCTACTCGTC ATACTTTAAT
TCAGATTTTC AAGATGACTA CTGCCTTCAA GACAAGTATT TTAAGGCAAA TAACCATAGA
GAAGGGGTAT CACCTGAAGA TTTTCCCACT CAGGAGATAC CTGTAGTTGG GCAAGAACAA
AGTTCGTCTA CTTCTTCAGA TCAAGGAACC GATAAGGTGG AGGGAAACAA TGTGAACAAG
AAAAAGCGTA CTAAAAAATC CAGACCTAAA ATTTCGATAA AGAAATTACT GCTGGCAATT
TTGATACTTG GTGTGATTAT TGGAGGAGTA TCCTGGGGAG TTAATCGAAT AATGGCTTTT
TTAGTAGTTC CCCAAGTAAC TGTACCTAAT GTACAGGAAA TGTCTTTAGA TGAAGCCCAA
GAAACTTTGC AAGAAGAAGG GCTTGATAGT GCAGTAACTG AAAGGGAACC TCATCCAGAA
ATTGAGGCAA CTTATGTTAT TCGGCAAGAC CCTGAAGCTG ACAGCACAGT TCGGCAAAAT
AGAACAATAG GTTTGATTAT TAGTGAAGGT CCGGAATTAC TGCAAGTACC GGACGTTGAA
GGAATGAGCC AACGTGAAGC TGTAATAAAA CTAGAACAAG GTGGATTTGA AGTTCAGGTA
GAGGAAAAAT ATGACGAAGT AGAAGCTAAT AAGGTGATAT CTCAAGACCC AAGTGAAGAT
ACAGAATTAG AGGAAGGTGA GCAGGTCTAT ATAACTGTTA GTTTAGGGGA AGAACCTTTT
GTTTTACCAG ACTTTGTCGG GGAAGATTTC GAAGAAATAG AAGAAGAAAT TGATGATTTA
GATTTAGAAC TGAGAAACAC TTATGAAGAA GAAGACCCCA CATTACCTTC AGAAGTCATT
ACTAGACAAT GGCCTGATTC CGGGGAAGAA GTGCAACCTG GGGACAATGT AGATCTTTGG
GTTAATAAAG CAGAAGAACA GGACGAAGAT GTAGAACGAC ATACTATACA GCTTGAGAAT
TTACCCACTG ATGAGGAAAT TAAAATCGTT GTTGATGATG AATTAGGAGC TCATGTAGTC
TTTGAAGGAG TTCCTGAAGA AGATTCAATG GAAATTGAGG GAACAGAACA AGGAATAGTT
GAAATATCTA CCCAAGATGA ACAAGGTGAA TTCACACAGA TTTACGATAT CATAATTTTC
CCCGAGTAA
 
Protein sequence
MIGELLINRY QIVMHVGTGG MASVYKAKDQ ILNRYVAIKV LLPQFAHDEE FIKKFRREAQ 
AAASLSHFNV VSIYDVGQDG DRHFIVMEYI EGKSLKEVII EKAPLPVNKA VDIVCQISDA
LIHAHANNVV HRDIKPHNIL ITTEGKAKVT DFGIARAVSE ATQTYTSSVM GSAHYFSPEQ
AKGSYTSERS DIYSVGVVLY EMLTGNVPFN GGSPVSVALK HIQEMPEKPT NYNPDIPQEL
ERVIMRALEK DQAFRYQNVK DLMDDLRNFV DNPTYSSYFN SDFQDDYCLQ DKYFKANNHR
EGVSPEDFPT QEIPVVGQEQ SSSTSSDQGT DKVEGNNVNK KKRTKKSRPK ISIKKLLLAI
LILGVIIGGV SWGVNRIMAF LVVPQVTVPN VQEMSLDEAQ ETLQEEGLDS AVTEREPHPE
IEATYVIRQD PEADSTVRQN RTIGLIISEG PELLQVPDVE GMSQREAVIK LEQGGFEVQV
EEKYDEVEAN KVISQDPSED TELEEGEQVY ITVSLGEEPF VLPDFVGEDF EEIEEEIDDL
DLELRNTYEE EDPTLPSEVI TRQWPDSGEE VQPGDNVDLW VNKAEEQDED VERHTIQLEN
LPTDEEIKIV VDDELGAHVV FEGVPEEDSM EIEGTEQGIV EISTQDEQGE FTQIYDIIIF
PE