Gene Nther_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1334 
Symbol 
ID6314444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1407947 
End bp1408888 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content38% 
IMG OID642643714 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001917505 
Protein GI188585960 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0783821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.599523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACTA TATTCATGGG TACACCAGAC TTTTCAGTTC CTTTTATTGA GGCAATTGCT 
CGAAGCACCC ACAATTTGAA CTTAGTTGTA ACACAACCAG ATAGAAGAAA AGGTCGGGGG
AAGGAATTGC AACCACCTCC GGCTAAAAGA AAAGCTGAGG AGCTTGGAAT AGATGTATTT
CAACCCGAAA GCATTCACAA TAATTATGCT TATCAGATTT TATCCGATAT TGAACCCCAT
TTAATAGTCA CCGCAGCTTA TGGACAAATC TTACCCAGAA AAATATTGGA TTTACCTCGG
ATAAAAGCTA TTAATGTCCA TGCCTCACTG TTACCGGAAT ACAGGGGAGC AGCACCTATT
CATCGAGCTG TTATGGACGG CAAGGAGCAA ACCGGGGTGA CTATTATGGA AATGTGCGAT
AAAATGGACG CAGGGGATAT ACTAAATTAT GAATCGGTAG ATATTGGAAA AACAGACACC
ACAGGAGATG TATATAAACA AATCATAACA GTTGGCCCCC AACTGCTAAT AGAAACTATG
GACTTACTGG AAAAAAATCA AGTAACTCCT TTAAAACAAG ATGAAAATCA AGTTTCTTAT
GCACCTAAAT TAAAAAAAGA AGATGAATAC CTGGATTTTT CTAAATATAC CAATACAGAA
GTGTTTAATA GAGTTAGGGG GTTGAACCCC TGGCCTGGAG CCTTTACTAA GTTTGAAGGC
AAACGCCTAA AAATATGGGA GACGAAAGTT CACAATAGTA GTTCATTTAA TTCAAACTCT
AAACCAGGTG AAATTATTGA GATAAACCAA CAAGGACCTG TGGTTAAATG TTGTCAAGGT
TCTGTCATAT TAACAAAAAT TCAACCATCC GGAAAAAAAG CAATGACTGG TGAACAGTTT
ATTCGGGGCT ATGATATAAA ATCAGGGATA CAACTGGAAT AA
 
Protein sequence
MRTIFMGTPD FSVPFIEAIA RSTHNLNLVV TQPDRRKGRG KELQPPPAKR KAEELGIDVF 
QPESIHNNYA YQILSDIEPH LIVTAAYGQI LPRKILDLPR IKAINVHASL LPEYRGAAPI
HRAVMDGKEQ TGVTIMEMCD KMDAGDILNY ESVDIGKTDT TGDVYKQIIT VGPQLLIETM
DLLEKNQVTP LKQDENQVSY APKLKKEDEY LDFSKYTNTE VFNRVRGLNP WPGAFTKFEG
KRLKIWETKV HNSSSFNSNS KPGEIIEINQ QGPVVKCCQG SVILTKIQPS GKKAMTGEQF
IRGYDIKSGI QLE