Gene Nther_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1325 
Symbol 
ID6314435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1397082 
End bp1398821 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content34% 
IMG OID642643705 
ProductFibronectin-binding A domain protein 
Protein accessionYP_001917496 
Protein GI188585951 
COG category[K] Transcription 
COG ID[COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATAG ACGGTTTTAC CATCAGAGGA ATTGTAGGCG AGTTACAAAA AATAATTGGT 
TCTAAAATTA ACCAAATTCA TCAACCTCAA AAAGAAGTTA TTACTCTAAA ATTATATGGA
AGAAGTGGCC AGAACACGTT GTTATTAAGT GCTCATCCCA AGTACTGTCG CGTGAATCTA
ACTGAAAAGA AACTGGAAAA CCCGGCTTCT CCCAGCTCAT TTTGTATGTT TTTGCGTAAA
TTTTTAGTTG GAGGAAAAAT TACCGATATT GTTCAGTATC ATGGTGATCG GATAGTTGAT
ATTCACATAA AACGCAGGGA TGAGTTTGAT TTGACCGAAG AATTCCTGTT AACTTGTGAA
ATAATGGGTA AGCACAGTAA TGTGATTTTA GTCAATAAAA AAACAAAGAG AATTATGGAT
GCTTTAAGGC GTATTCAAAG AGAACTCTCT GCCTCTGATC AAAGAGAATT AGTGCCGGGG
ACCCTATTTG AACGACCACC AGCTCCAGAT AAACTAGATC CCTTTTCTGA AAATCTAGAT
AAAGATAAGT TTAATAAACT ATTATCTCAA TACCAAAATC AAATAGATAA ACTGTTTTTT
GATAACTTTT TAGGAGTAAG TCCCTTTTTA TCAAAGCAAA TAATAAATAC TACCTACCCA
GAAGGTGTAG AAGCTAACGA GCTGTATAAT ATTTGGGAAA AAATTATAAA TGATATAATG
TCCCTGTCAT ATCAACCTGT TATTGTTTAT GACAAAACCA CAACTGAGAT GAAGGATGTT
TATTGGGATA ATAGATTTTA TAATACTGAT AATTTTAAAT TAGTCGAGTA CGATACATTA
AATCAAGCAA TAGATGATTT TGCTCATTAT AAGGGACAAG AAGAACTGGC TAAGCAATTA
AAATCACAAC TAAAGAAAAA ACTATCCGGA GCAGCTAAAA AAGCAAGAAA AAAACTTAAA
AAACAAACAA AGGAATATGA AACTTCGGAA GGTGGTACTA AATACAAAAA ATATGGTGAA
CTCTTAAGTG CTAATTATCA TTTAGTTAAT AATGCACATA CCGAAACAGT AGAAGTTTAC
GATTATTATC AAGATCCTCC CAAACTACTA GGAATTAAAA TCGACCCATC TAAAACTCCA
GGAGAAAACA TTGACCATTA CTTTAAAAAA TTTAAAAAAT GCACCAATCG TATCAAAAAA
CTAGGAACTG AGATAAAGAA AACCAGGCAG GAAATTTCTT ATTTGGAAGG CTTACTATTC
CAAGTCGATG AAGCAGCTAA ATTGGAGGAA CTAAAAGACA TTAGGCAGGA GCTAATGGAG
CAAGGTTACT TAAAGAAACA AACTAAAGAC CGAGAAAAAG CCCCTCGAGG TAGTGAAGGT
GATTTTATCA AATATACTTC TAGTGATGGT TTTACAATTA TGGTAGGAAA AAACAATAAA
CAGAACGATC GCTTAACGTT AAAGAAGGCT TCCAAAAACG ACACTTGGTT TCACACCAAG
GAAATTGCAG GAACTCATGT AATTGTTAAA GGTGATAATA TTCCGGAAGC AACTATCCTT
GAAGCTGCAC AAGTTGCGGC ATACCATTCT AAAGCTAGAA ACTCTGAAAA TGTACCTGTG
GATTACACTC AAATTAAAAA CGTCAGAAAA CCCAAAGGAG CAAAACCAGG AATGGTAATT
TATGATAATC ACAAGACTTT ATATGTGGAT CCAAAGTTAC CACAAACTGA CTCCAACTAA
 
Protein sequence
MPIDGFTIRG IVGELQKIIG SKINQIHQPQ KEVITLKLYG RSGQNTLLLS AHPKYCRVNL 
TEKKLENPAS PSSFCMFLRK FLVGGKITDI VQYHGDRIVD IHIKRRDEFD LTEEFLLTCE
IMGKHSNVIL VNKKTKRIMD ALRRIQRELS ASDQRELVPG TLFERPPAPD KLDPFSENLD
KDKFNKLLSQ YQNQIDKLFF DNFLGVSPFL SKQIINTTYP EGVEANELYN IWEKIINDIM
SLSYQPVIVY DKTTTEMKDV YWDNRFYNTD NFKLVEYDTL NQAIDDFAHY KGQEELAKQL
KSQLKKKLSG AAKKARKKLK KQTKEYETSE GGTKYKKYGE LLSANYHLVN NAHTETVEVY
DYYQDPPKLL GIKIDPSKTP GENIDHYFKK FKKCTNRIKK LGTEIKKTRQ EISYLEGLLF
QVDEAAKLEE LKDIRQELME QGYLKKQTKD REKAPRGSEG DFIKYTSSDG FTIMVGKNNK
QNDRLTLKKA SKNDTWFHTK EIAGTHVIVK GDNIPEATIL EAAQVAAYHS KARNSENVPV
DYTQIKNVRK PKGAKPGMVI YDNHKTLYVD PKLPQTDSN