| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1314 |
|---|
| Symbol | |
|---|
| ID | 6315552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1387051 |
|---|
| End bp | 1388229 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642643694 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001917485 |
|---|
| Protein GI | 188585940 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02828] putative membrane fusion protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000647629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAACGAA GAAATAAAAC TGAAAAGGTT GTAAAACTTC AAAGAAACAA TAAATCAGAA
CAGACAGGAA CACATAAAAA GCAAAATTTA CTACCTGTAA TTTCATTGCT TGTTGCTGTA
TTTGTTTTAA TCATATTAAT TTCTGGTATG AGAAGTTTTT TTGTTACCCG ACTAGTTAAT
ATAGAACTTG TAGAACAACA AAAGGTGGAT CAGATTATAG AAGAACAACC GGCTACTATA
AAGCGGGAAG AGCAGGTGAT AACTGCTCCA GTTTCCGGTC AAGTTGACAG GAAAGTGGAT
GAGGGCATCC GGGTCAAACG CAATCAAACA GTCATGGTTT ATGACGAACT TTCAAATGAA
AAGGATAATT ATCAAAGTGA AGGTGAAATT AAGCGTCAGA TAGACAGATT AGCTGTAGAA
TTTGAATCAG AATTGACATC AGCTCGTGAA CAAGATTTAG TTAAAAGTCA AATTGAAGAA
ATTATCCAAG ATATTCAAAA CTTATCTGAT GAATATCACA GAATAGTTGA TGAAAAAGAA
AACGAAAATA GCTCTCTAAG AGAGGTTACT TCACCAGAGC CCGGTATTGT CAGCTATAAT
ATAGACGGAT TGGAAAATGG TTTTAATGAT ATAGACAAGC TGTCACCTAA ACGATTGCAG
CGTTACCGTG AGCAACACGA GAATTCAACT TATGATCAAG ATATAGTTGT CTCAAGAGCT
CCACTATTCA AAGTGGTGGA TAATTATAAC TGGAAGGCAA TAGTTGAAAT TTCACAAGAA
GAAACCATTG ATAATGAAGT GGGTGATTGG TTATCAGTCA AATTTGATTT TGCTGATAAT
GAAATTGAAG GTAGAATTGT GGAAATAAAA GAATTTGATT CCCAAACTAT AATGGTGTTA
GAATTTGAAC GTGAGCTAGA AAAATTTTGG AAAAATCGGT TTGCAGAAAT TGATATTGTC
AAAGATACCA AGATAGGGTA TAAAATTCCT CAAAGAGCCC TGACCGAGAA TAATGGTCAA
TTAGGGGTAT ACCTTGTCAA GCATGGTGTG GTAAAATTTG AAGAAATAGA ATTAATTTCC
GAATTAGAAA ACAATGAAGT ATTAGTCGAT GGCTTGAATG AGGGGAATTT ATTGATTAGG
AATTCCTTTT TCGTTCGAGA AGGTGATCGA ATACGATAA
|
|---|
| Protein sequence | MKRRNKTEKV VKLQRNNKSE QTGTHKKQNL LPVISLLVAV FVLIILISGM RSFFVTRLVN
IELVEQQKVD QIIEEQPATI KREEQVITAP VSGQVDRKVD EGIRVKRNQT VMVYDELSNE
KDNYQSEGEI KRQIDRLAVE FESELTSARE QDLVKSQIEE IIQDIQNLSD EYHRIVDEKE
NENSSLREVT SPEPGIVSYN IDGLENGFND IDKLSPKRLQ RYREQHENST YDQDIVVSRA
PLFKVVDNYN WKAIVEISQE ETIDNEVGDW LSVKFDFADN EIEGRIVEIK EFDSQTIMVL
EFERELEKFW KNRFAEIDIV KDTKIGYKIP QRALTENNGQ LGVYLVKHGV VKFEEIELIS
ELENNEVLVD GLNEGNLLIR NSFFVREGDR IR
|
|---|
| |