| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1310 |
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| Symbol | |
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| ID | 6315591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1384097 |
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| End bp | 1384816 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642643690 |
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| Product | sporulation sigma factor SigE |
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| Protein accession | YP_001917481 |
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| Protein GI | 188585936 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000184343 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTTT TTAGAAATTT ATTTGTTAAA ATTGTTATAA AATTATACCA ATGGAATATT
ATAAAAAAAC CGCCAGTGCA TTATATAGGG AGTAGTGAAG CCTTACCACC ACCGTTAACA
AATGAAGAAG AAAAAGATTT ACTTGAAAAA CTAAAAGCTG GTGATAAAAA AGTAAGGTCA
ACTTTAATTG AGAGAAATTT AAGGCTGGTG GTTTATATTG CCAGAAAATT TGAAAATACT
GGTGTAAATA TAGAAGATTT GATCTCTATA GGGACTATCG GCTTAATAAA AGCTGTTAAT
ACTTTTGATC CTCAAAAGAA AATTAAACTA GCTACCTATG CTTCAAAATG TATAGAAAAT
GAAATTTTGA TGTATTTGAG ACGCAATAAT AAATTAAAAA ATGAAGTATC AATCGATGAA
CCATTAAATA TCGATTGGGA CGGAAATGAA CTCTTATTGT CTGATGTATT GGGAACTGAT
ATTGACATTA TACATCAAAA TATTGAGCAA AAAGTAAACA AAAATTTACT GAAGATGGCT
TTGGAAAAAT TATCCCAGAG AGAAAAAACT ATTATGAAAT TGCGGTTTGG ATTAGGGCGT
CAAGAAGGTA AAACACAAAA AGAAGTAGCC GATATACTGG GAATTTCTCA GTCTTATATT
TCAAGATTAG AAAAGAGAAT TATTAATAGA ATGAGAAAAG AAATAAACAA AATGCAATAA
|
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| Protein sequence | MKFFRNLFVK IVIKLYQWNI IKKPPVHYIG SSEALPPPLT NEEEKDLLEK LKAGDKKVRS
TLIERNLRLV VYIARKFENT GVNIEDLISI GTIGLIKAVN TFDPQKKIKL ATYASKCIEN
EILMYLRRNN KLKNEVSIDE PLNIDWDGNE LLLSDVLGTD IDIIHQNIEQ KVNKNLLKMA
LEKLSQREKT IMKLRFGLGR QEGKTQKEVA DILGISQSYI SRLEKRIINR MRKEINKMQ
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