| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1300 |
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| Symbol | |
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| ID | 6315163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1372400 |
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| End bp | 1373728 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642643680 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001917471 |
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| Protein GI | 188585926 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.432569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTGACC CTGATACTGT CATTACTGGC TTTAGTGTGG ATTCACGTTA TGTCAAGCAG
GGCGATATGT TTGTATGCTT ACCGGGAGAT AAAACCGATG GTCATAATTT TATAGACGAA
GCAATTGATA ATGGTGCCCG AGGATGTCTA GTAAATCGTG ATATTGAACT GTCTCGACGT
CATTCAGTCC ATCCACCCTT GGTAATAAAA GTCAATGATA CGTTGATGGC CCTGCAAGAA
ATAGCCAGAA AGCATCGACA AAAATTTGGC GTTTCTGTGG TAGCTGTTAC TGGTAGTATT
GGTAAAACTA CCACCAAAGA TATGATCGCC AGTGTTTTAG CTGAAAAGTA CTCTATTTTA
AAAACCCACG GTAATTTGAA TAGTGAAATT GGACTCCCTT TGATGTTATT GGAATTAACT
CAACATCATC AAGTTGCTGT ACTTGAAATG GGAATGAACA ATCAAGGAGA AATAGCCAGG
TTATGTGAGT TGGCAAGACC TAATGTAGGT GTTATCACAA GGATTGCCGA GTCTCATATA
GAGAAGCTGG GCAGTTTAGA AAACATTGCA GAAGCTAAAG GTGAACTGTT GGAGAATTTA
TTGCCTGGTG GGACTGCTAT TTTGAATTGC GATGATAACT GGGTTAGACG ACTGAGGTCT
AAAGTTCCAG GTGAAGTTTT ATACTATGGT TTAACAGATG GAGATTTATC GGCTTATAAT
GTCAGAGTCG ACAAGGACAA AACGAATGCG AAAATTATGA GTAATGATAA AAGTGAGCAG
CTAAACTTAC CTTTAATTGG AAAGCATAAC TTGAGTAATG CTTTGGCGGC AATTGCTGTT
GGTAGAGTCT TTGGACTCGA TTTGACTCAA TCTATCCGTG CACTTGAAGG TTTTACTGGT
ACATCAATGA GGAATCAAAT AAAGTATCAT AAAGACATGA TAATTATTGA TGATACTTAT
AATGCCAATG TACAATCTAC CTTGGCAGCC TTTGATGTAT TAACAAATTT ACCACTCAAC
CGTAGAATAG CCGTTTTAGG AGATATGTTC GAATTAGGTG ATTATACAGA AAAAGCTCAC
AAAACTGTGG GTGAACAGGC TGTAAACAGG GGATTTGATT ATTTGATTAC AGTTGGTGAA
CTATCAAAAA CCACTCAAGA AGCAGCTGAT AAGTTGGGAA TGCCTGAGCA TCAAAACATT
CATGTTGCTG ATCGTGAACA GGCTATTCAA AGGATATTAC AGATAGTTAA ATCTGGAGAT
GGAATACTTG TTAAGGGTTC TAGAGGTATG GCTATGGAAA AGATAGTAAA TTCGTTGTTA
AAAACTTAG
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| Protein sequence | MGDPDTVITG FSVDSRYVKQ GDMFVCLPGD KTDGHNFIDE AIDNGARGCL VNRDIELSRR
HSVHPPLVIK VNDTLMALQE IARKHRQKFG VSVVAVTGSI GKTTTKDMIA SVLAEKYSIL
KTHGNLNSEI GLPLMLLELT QHHQVAVLEM GMNNQGEIAR LCELARPNVG VITRIAESHI
EKLGSLENIA EAKGELLENL LPGGTAILNC DDNWVRRLRS KVPGEVLYYG LTDGDLSAYN
VRVDKDKTNA KIMSNDKSEQ LNLPLIGKHN LSNALAAIAV GRVFGLDLTQ SIRALEGFTG
TSMRNQIKYH KDMIIIDDTY NANVQSTLAA FDVLTNLPLN RRIAVLGDMF ELGDYTEKAH
KTVGEQAVNR GFDYLITVGE LSKTTQEAAD KLGMPEHQNI HVADREQAIQ RILQIVKSGD
GILVKGSRGM AMEKIVNSLL KT
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