| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1285 |
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| Symbol | |
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| ID | 6315178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1354228 |
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| End bp | 1355499 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642643664 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_001917456 |
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| Protein GI | 188585911 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0952765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAGAT GGAAATACGT GACGATTTTA TTGGTAATAC TGTTAGCTGT ATTTGGACTG
AGTTTTTATT CCTATCATTA TGCAAGGGAT AACATCAATC TAGGATTGGA CTTGTCTGGA
GGTATATATG TCCTCTTGGA AGCTGAAGAT GTAGCAGGAG AAGACGATGA TGATGCCATT
GAACGGGCTA AGACAATTAT TAGGTCTAGA GTAGACGAGC TGGGCGTTTC GGAACCTGTA
GTTCAACAAG AAGGAGCTAA TAGAATCAGA GTTGAATTAG CAGGTGCCGG GATTGATCGA
GAGCGAGCAA TGGATGTTAT TGGCAGAACG GCACAACTAG AATTTTACGG CCCAGACCTA
TATCGACAAA TTGATGTGAC CGAAGATGAA CAAATCGATT TAGAGAATAA AGATGTTAGT
CCTTTTGTAA CTGGAGAACA CGTTGAAGAT GCTGGGGTTG GATATACTCC CCAAGGTCAG
CCTTATGTAA ATGTCCATTT TACCTCCCAA GGCGCTGATC GAATGCGCGA AGCCACTCAA
GAACACATGA GAGATCATTT AGTGATAGTT TTAGATGGAG AGTTAGTTTC AGCCCCTGAG
ATTAGGGATG TTATTCACGA TCAAGGTATG ATTGATGGTA TGGGTTCAGT AGAAGAAGCA
CAAAATGTCG CCTTGATGCT AAGGTCAGGG GCTCTACCTG TGTCTTTAAC AGAGCTAGAA
ACCCGAACCT TGGGACCATC CTTAGGAGAA GAATTTCAAG AACAAAGTTT ACAAGCTGGA
TTACTTGGAC TTGCTTTGTT AGTGATATTT ATGCTGGGTG TTTACCGTTT GCCTGGATTA
ATGGCCAATA TTGCTTTGGC TGTTTATTTG GTGATTATTT TTAATGCTTT GATCTATCTA
GATGCAACTT TTACGTTACC GGGGATTGCA GGTCTAATAT TATCTCTGGG AATGGCTGTC
GATGCCAATG TGATTATATT TGAAAGAATT AAAGAAGAAT TAAACTATGG TAAAACCCTT
CGTGTCTCTG TAGAATCAGG CTTCAAAAAA GGTATCAGAA CTATTTTAGA TGCCAATATC
ACAACCTTAA TTGCTGCCGC TGTCCTATTC TACTTTGGGT CCGGTCCCAT CAGAGGTTTT
GCCGTAACAT TATCAACTGG AATAATTGCA AGTATGATTA CTGCAGTCTT GTTTACGAGA
GTGATCTTAA AACTGCTGGT GTCTAGCAGA TTAATTAGAG ATACTAAGTA TTTTGGAATA
CAAAGGGGTT AG
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| Protein sequence | MIRWKYVTIL LVILLAVFGL SFYSYHYARD NINLGLDLSG GIYVLLEAED VAGEDDDDAI
ERAKTIIRSR VDELGVSEPV VQQEGANRIR VELAGAGIDR ERAMDVIGRT AQLEFYGPDL
YRQIDVTEDE QIDLENKDVS PFVTGEHVED AGVGYTPQGQ PYVNVHFTSQ GADRMREATQ
EHMRDHLVIV LDGELVSAPE IRDVIHDQGM IDGMGSVEEA QNVALMLRSG ALPVSLTELE
TRTLGPSLGE EFQEQSLQAG LLGLALLVIF MLGVYRLPGL MANIALAVYL VIIFNALIYL
DATFTLPGIA GLILSLGMAV DANVIIFERI KEELNYGKTL RVSVESGFKK GIRTILDANI
TTLIAAAVLF YFGSGPIRGF AVTLSTGIIA SMITAVLFTR VILKLLVSSR LIRDTKYFGI
QRG
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