Gene Nther_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1246 
Symbol 
ID6315266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1315627 
End bp1316157 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content37% 
IMG OID642643625 
ProductAppr-1-p processing domain protein 
Protein accessionYP_001917417 
Protein GI188585872 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.07141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0339932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGA AGATTGGCGG TGTTACTCTA AAAATCACTA AAGGTGATAT TGCCAATCAA 
AATGATGTGC AAGCTATAGT TAATGCAGCC AATAGAGAGT TGCGAACTGG TGGTGGAGTA
GCAGGAGCTA TCCATCGAGG TGCTGGTCCG GAATTAGAAC AGGAATGCCG ACAATATGCT
CCAATTACAC CGGGTGAAGC AGTTATAACA GGAGCTCATA ATTTACCTAA TGATTATGTA
ATCCACTGTT TGGGGCCAGT ATATGGTGTT GATAAGCCAC ATGATGAATT ATTGATTAAA
TGTTATAAAA ATGTTTTAAA GAAAGCCGAT GAACATGAGA TTAGATCCGT AGCATTCCCT
GCAATATCTA CTGGAGCATT TGGATATCCC ATTGAAGAAG CTACCGAAAT TGCCTTAGAT
ACTGTTAAAG CGCAGGCAGA TAAACTTAAA AATATTGAAT TAATAAAATT TGTATTATTT
GACGATAACA GTTTTAAAAC TTATCAAGAA AAAACAAAGG AAATAGTCTG A
 
Protein sequence
MEKKIGGVTL KITKGDIANQ NDVQAIVNAA NRELRTGGGV AGAIHRGAGP ELEQECRQYA 
PITPGEAVIT GAHNLPNDYV IHCLGPVYGV DKPHDELLIK CYKNVLKKAD EHEIRSVAFP
AISTGAFGYP IEEATEIALD TVKAQADKLK NIELIKFVLF DDNSFKTYQE KTKEIV