Gene Nther_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1224 
Symbol 
ID6314299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1298599 
End bp1299402 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content34% 
IMG OID642643601 
ProducttRNA methyltransferase complex GCD14 subunit 
Protein accessionYP_001917395 
Protein GI188585850 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00244544 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCACAG GATTAGACAG TAAAAGAATG ATAACAGATG GAAACAAATT CAAAAAGGTA 
GTTGATCTGA AAGCTGATAG TGTCCAATTA CCAACGGGGA TTCTAACAGG TGAAAAGTTG
CGACAGTTAT CTCCAGGTTC GGAATTTTAT TTAAACGAAA AAAAATACTT TATATTTGAA
TGTACATTAG CTGATTTTCT TGAAAAAAAA TTAGAGAGAA AGACTCAAAT TATGTATCCT
AAAGAAATCA GTTTTATGAT TTATAAACTT GATATTTCAC CAGGTGATAG TGTAGGCGAA
GCGGGTACTG GTTCTGGTGC CATGACACTG TCCTTGTCTC GTACAGTAGG TCCCCAAGGG
AGTGTATACA CTTATGAAAG GAGATCAGAC TTCAGTAAAT TAGTAAATAA AAACTATTCT
AGGGGAAGAA AATTTGATAA TGTAACCTTT TACAATCAAT CAATAGAAGA AGGAATTTTT
GAAACCGACT TAGATGCGTT TGTACTAGAT GTGAGAGAGC CCTGGGAAGT ACTAGACAAA
ATAAGTCATT CTTTAAAACC TTCGGGAAAT TTAGGTGTAT TAGTACCCAC ATATAATCAG
ATTAGTGCTA CGCTTCCAGA ATTAAAAGAT AATAGTTTCT TTGTAACAGA CATTGTTGAA
TTGTTATTGA GAAGATATAA ACATAACCCA GAACGTATGC GACCTGAAGA TACAATGATA
GGGCATACAG GTTATTTGAT AATTGCCAAA AAATTAACAG GTGAAACTAA AAGTTTAGAA
GAAATTTCTG AATGTGAGGA ATGA
 
Protein sequence
MSTGLDSKRM ITDGNKFKKV VDLKADSVQL PTGILTGEKL RQLSPGSEFY LNEKKYFIFE 
CTLADFLEKK LERKTQIMYP KEISFMIYKL DISPGDSVGE AGTGSGAMTL SLSRTVGPQG
SVYTYERRSD FSKLVNKNYS RGRKFDNVTF YNQSIEEGIF ETDLDAFVLD VREPWEVLDK
ISHSLKPSGN LGVLVPTYNQ ISATLPELKD NSFFVTDIVE LLLRRYKHNP ERMRPEDTMI
GHTGYLIIAK KLTGETKSLE EISECEE