Gene Nther_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1221 
Symbol 
ID6316973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1295715 
End bp1297292 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content35% 
IMG OID642643598 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001917392 
Protein GI188585847 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0121657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA AATTTAAGCC CAAGACCTTA TTTTTAAAAC TGATGCTGAG TTATTTGGTT 
GTCATACTAG TAACTTTGCT AGTATTAAGT GGCATTATGT CCTATTTAGT AGAAGAATAT
TTTTATGGTG CCAGAGAATG GGAAGTGAAT ACTCAAGCCC GTGAAGTTGC TAGTATGTTA
CAAGAGCCTA TCCAAAATAG TGAATTACAG GATATTATGC AAAAAGCTCA AACTCTTTCA
CGTTCATTTG AAGCAGAAAT AGCAGTTTTT GACGAAAATG GAAGAAATAT TACAATCGCA
AATTACTATT CCGATGAAGA TACCGGGACA GTAGAATTTG AAAATCATGA GCTTGACCAT
GTATTAGAAG GTAATTCCCT TACGAAAAAA CTAGTCGGTC CACAAGCGGA GCGATTATTG
ATTGCCATAC CAGTATATGA AAAAGAAGAA GAGAATGATG AAAAACAGAA CACAGATGAA
ACTAGAGAGA GTGATAATGA AAGTGAAAGT AATCAGCAGG AAGATGATCA AAATGAAGAA
GAACAAAAAG AAGTTATAGG TGTAGTAAGT TTAAATGTGC CTTTAGCAGG TATTGAGGAC
ACTTTGGCTA ATATTAGTCG GTTGACTTTA ATTTCAGGAG GAATTGCAAT TCTTGTAGCA
AGTGCCTTTG CCCTGTCTCT TTCAAAGAAT ATTACTAGAC CGTTGAGTTC AATCAATGAG
TCTGCACAAG CCCTGGCTAA AGGTGAATTT ACCCAGAAAA TTGGTCGCGA GGTGCTTGAG
GAAACCGATG ATGAATTGGG TAAAGTTTCC CGCACTTTTC ATTTAGCTGC CCAGGAAATT
GAAAACAATA TTGAAGAACA AAAAAGGTTA GCTGTTTTTA GAAAAAATTT AGTAGATAAT
GCATCCCACG AATTCCGGGC TCCCTTAAGT GCCATAAGGG GTTATAGCGA ATTGATTATT
GATGGTATTG TTCCTGAACA AGATCAAACC CACTATTTGA ACCTAATATG GAAACATGCC
GTTGAATTAA ATGAAATGGT CGATACGTTA TTAGACCTGT CGAGTTTAGA AACGGGTACT
ATAAACTTAA ACAAAGAGAA GATGACAGCC AAGGAAGTTT TAATTGATGC CATGGATATG
GTATTACCTG ATGCTGAAAA GAAAAATCAA ACTATAACCA TAGATAAGAG TGAAAGTAAA
ACATTCTTTA AAGGAGACCC TCCGAGGGTA AAACAGATTA TTGTTAATTT GTTAAAGAAT
GCTATCCAGT ATACTTCTGA AAAAGGTACA ATAAGGTTAA GGGCATTTGA TACAGAACAA
TACGTTGCCT TGCAAGTGGT TGATAACGGC ATTGGCATCC CAAAATCAGA GCTTGATAGT
ATTTTCCAAA GGTTTTACAA GGTAGATAAA GCAAGAAATC AAAATAAAAA AAGCGGAAGC
TCTGGATTAG GTTTGGCTAT TGTCAATGAA TTAGTAAAAA TTCATAACGG CAAAATAGAA
GTGGATAGTG AAGAAGGAAA GGGCAGTACA TTTACTGTTT ATTTTCCGAG ATCTTATAAT
GTTGATGGAA CTGAATAA
 
Protein sequence
MIKKFKPKTL FLKLMLSYLV VILVTLLVLS GIMSYLVEEY FYGAREWEVN TQAREVASML 
QEPIQNSELQ DIMQKAQTLS RSFEAEIAVF DENGRNITIA NYYSDEDTGT VEFENHELDH
VLEGNSLTKK LVGPQAERLL IAIPVYEKEE ENDEKQNTDE TRESDNESES NQQEDDQNEE
EQKEVIGVVS LNVPLAGIED TLANISRLTL ISGGIAILVA SAFALSLSKN ITRPLSSINE
SAQALAKGEF TQKIGREVLE ETDDELGKVS RTFHLAAQEI ENNIEEQKRL AVFRKNLVDN
ASHEFRAPLS AIRGYSELII DGIVPEQDQT HYLNLIWKHA VELNEMVDTL LDLSSLETGT
INLNKEKMTA KEVLIDAMDM VLPDAEKKNQ TITIDKSESK TFFKGDPPRV KQIIVNLLKN
AIQYTSEKGT IRLRAFDTEQ YVALQVVDNG IGIPKSELDS IFQRFYKVDK ARNQNKKSGS
SGLGLAIVNE LVKIHNGKIE VDSEEGKGST FTVYFPRSYN VDGTE