Gene Nther_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1202 
Symbol 
ID6316711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1271932 
End bp1272591 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content36% 
IMG OID642643575 
Productprotein of unknown function DUF502 
Protein accessionYP_001917373 
Protein GI188585828 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0172325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.43521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGAA CTGTATTAAA GAAGGTGCGG AATTATTTTA TAGCTGGAAT AATTGTACTG 
CTACCTATTG TTACTAGCAT CTATCTATTT TGGGTGCTGT TTAATTGGCT GGATAGCTTG
GTAGGATGGC CTTTAAAAGT TGTCCCATCG GATTTACCTG GTGCTGGTAT TGTATCTGCT
ATTATAATCA TATTTTTGAC TGGTCTTTTG GCAACCAATA TAGTAGGTAA GAAAATTCTG
AGTCTAATGG ATTTAATTTT TAGCAGGGTC CCCTTTGTGA GAAATATATA TATAGCAGTC
AAGCAACTCT TGGATACATT TTCTCAAAAT AGTAAAACTT CTTTTAAAAA AGTGGTTATG
GTTGAATATC CGAGAAAGGG TATTTATGCT ATGGGCTTTG CTACTGGTGA TGCAAAAGGT
GAGCCTCAGA AACGTACTAG TTCAAATCTG TTAAGTATTT TTATACCGAC TACTCCTAAT
CCTACATCTG GAATGTTAAT AATGGTTCCC AAGGAAAATG TGACCTTTTT AGATATGAGT
ATCGAAGAGG GATTAAAATT TGTGATTTCA GGTGGGGTAG TAGCACCTCC TGTCGCGGAC
ATGCATGATA AAACTTACAT AAAGGAGGGA CAAGGGGAAT ATGAAGAAAA AAGAAATTAA
 
Protein sequence
MARTVLKKVR NYFIAGIIVL LPIVTSIYLF WVLFNWLDSL VGWPLKVVPS DLPGAGIVSA 
IIIIFLTGLL ATNIVGKKIL SLMDLIFSRV PFVRNIYIAV KQLLDTFSQN SKTSFKKVVM
VEYPRKGIYA MGFATGDAKG EPQKRTSSNL LSIFIPTTPN PTSGMLIMVP KENVTFLDMS
IEEGLKFVIS GGVVAPPVAD MHDKTYIKEG QGEYEEKRN