| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1187 |
|---|
| Symbol | |
|---|
| ID | 6315809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 1259205 |
|---|
| End bp | 1260545 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642643560 |
|---|
| Product | RNA modification enzyme, MiaB family |
|---|
| Protein accession | YP_001917358 |
|---|
| Protein GI | 188585813 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.0386779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGACG TACCAAGGGT GAAATTCATT ACTTTTGGAT GTAAAGTTAA TCAGTATGAT
TCAGAAGCCC TGAAAGAATT ATTCCAGGAC AGGGGATTTG AGATAAGTGA TTGGAATCCT
CAGGAATTGG ATAATATTGA TGTGGCTATT ATTAACACAT GTACAGTTAC ACATTTAGCC
GATCGCAAGG CTCGACAGCA TATCAGAAAA CTCAAGAGGC GAAACCCAAA TTGTGTTATA
GCGGTTACTG GCTGTTATCC TCAGACTGAT CCTCAAACAG TTAAAGCTTT AGAAGGCGTG
GATATTGTCC ATGGAATTGA AGATAGATCA GGTTTAGTTG AACTGGTAGA GCAGGCTTTA
TCTAAGGAAA ACATCTGGCA GGGAGCTATA CATCTACATG ACTCAAGACC AAAGGGAGAA
TTTGAAAACT TAAAGATCAA AAACTTTAAA AAACATGATA GAACAAGACA TTTCTTAAAA
ATACAAGAAG GTTGTGACCA ATTTTGTTCT TATTGTATTA TCCCTTATGC CAGAGGACAT
TTGCGAAGTC GCCCGCCAGA AGATGTTATT TCTGAGATTA AACAGGCAGT TAGTAATGGA
TTTAAAGAAA TAGTACTAAC AGGTATAAAT CTAGGAGCTT ATGGCCGTGA AAATTCAAAT
TTACCCAATT TGGCAACCTT GCTGGATAAA ATCATTCACC TAAAGGGGGA TTACAGAATA
AGATTGAGCT CTTGTGAACC TCAAGAAATT ACTATTGGGT TATTAGAGCT GGTTACTAAT
TCTGAAAAAA TCTGTAAACA TCTTCATATA CCTCTCCAAA GTGGGGATAA TGAAATTTTA
AAAGCAATGA ATAGAGATTA TTCAAAAGAA GATTATAGAA AAATAGTCAT GGCTGCTAGG
GAAAAGTCTC CTTCCATAGC AATAACCACT GATATAATCG TAGGCTTTCC GGGTGAATCT
GCGAATCACT TTCGAAATAC TAAGGAATTT GTCAAAAAGA TAGGTTTTTC TGATATTCAT
ATTTTCCAAT ATTCACCGAG AAAAAATACA CCAGCCCAAG AATTTTCAGA CCAAGTGCAT
AGTAAAGAAA AAAAAGCTCG TAGCCAAGAA TTAATTGAGA TTTCTCGAGA TCTTAGCAGA
GTTTATCACG AACAGTTTAT TGATAAAACT GTTCCTGTAT TAGTTGAAAA ACATGAAGAG
GATGTTGCTT CTGGGGTCAG TGATACCTAT TTAAAAGTAA CATTCAATGT GGAATCCGAG
ATTAATTTAT ATAACAAAAT TTGTCAGGTA CAAATAAATA GTGCCGATGA AGAAATGGTT
TATGGAGAAT TACCTGAATA A
|
|---|
| Protein sequence | MSDVPRVKFI TFGCKVNQYD SEALKELFQD RGFEISDWNP QELDNIDVAI INTCTVTHLA
DRKARQHIRK LKRRNPNCVI AVTGCYPQTD PQTVKALEGV DIVHGIEDRS GLVELVEQAL
SKENIWQGAI HLHDSRPKGE FENLKIKNFK KHDRTRHFLK IQEGCDQFCS YCIIPYARGH
LRSRPPEDVI SEIKQAVSNG FKEIVLTGIN LGAYGRENSN LPNLATLLDK IIHLKGDYRI
RLSSCEPQEI TIGLLELVTN SEKICKHLHI PLQSGDNEIL KAMNRDYSKE DYRKIVMAAR
EKSPSIAITT DIIVGFPGES ANHFRNTKEF VKKIGFSDIH IFQYSPRKNT PAQEFSDQVH
SKEKKARSQE LIEISRDLSR VYHEQFIDKT VPVLVEKHEE DVASGVSDTY LKVTFNVESE
INLYNKICQV QINSADEEMV YGELPE
|
|---|
| |