Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1186 |
Symbol | |
ID | 6315808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1258504 |
End bp | 1259226 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642643559 |
Product | protein of unknown function DUF558 |
Protein accession | YP_001917357 |
Protein GI | 188585812 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0115216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACACGTG TGTTACGTTT GAAAATTGGT GATCGAGTAA TTTTGCTAGA TGGTAAAGGA GGAGCCTGTT TTAGTTTTAT AAATAGATTA GGAGAAGGCC AAATTGAATT TGAATTAGAA GAACCATTAA TTGATAATAA AGAAGCGCCT ATACGAATAA CCTTGGCCCA ATCATTGATT AAAAAAGACA ACTTTGAATT TGTACTCCAA AAAGGTACCG AATTGGGAGC GACTGAATTT TATCCCCTGA TAAGTCAACG TACAGAAGTG AATTTATTAA ATAAATCAGA CAAAAAAGTC TCCAAAAAGC TAACTCGCTG GCGAGAAATA GTTAAAAACG CTGCAGAGCA ATGTCAGAGG CAAGTACTAC CTCTAATTCA TTACCCCGTC AATTTTGAAA AGTATCTAAA AAATAACAAT GAGAATTCGA ACAATAATGG TTCGAGATTA AAAATAATGT GTCATGAACA AGAAAACACC CCCTTAAAAA AGGTCCTGAA AACTATCGAG ACTCCACCGT CTTCTGCTAT AATATTGATA GGGCCAGAAG GGGGTTTTTC CCATAATGAA GTGGATTTAG CTCGGGAACA AGGTTTTTCT TCTGTGAGTA TGGGTCCTAG AATACTAAGA GCTGAAACTG CAGGTATAGT TGCCGTCTCA GCAATTCTAT ACGAATTAGC AGATTTGGGA GGAACTGAGC AATGTCAGAC GTACCAAGGG TGA
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Protein sequence | MTRVLRLKIG DRVILLDGKG GACFSFINRL GEGQIEFELE EPLIDNKEAP IRITLAQSLI KKDNFEFVLQ KGTELGATEF YPLISQRTEV NLLNKSDKKV SKKLTRWREI VKNAAEQCQR QVLPLIHYPV NFEKYLKNNN ENSNNNGSRL KIMCHEQENT PLKKVLKTIE TPPSSAIILI GPEGGFSHNE VDLAREQGFS SVSMGPRILR AETAGIVAVS AILYELADLG GTEQCQTYQG
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