Gene Nther_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1186 
Symbol 
ID6315808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1258504 
End bp1259226 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content37% 
IMG OID642643559 
Productprotein of unknown function DUF558 
Protein accessionYP_001917357 
Protein GI188585812 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0115216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACACGTG TGTTACGTTT GAAAATTGGT GATCGAGTAA TTTTGCTAGA TGGTAAAGGA 
GGAGCCTGTT TTAGTTTTAT AAATAGATTA GGAGAAGGCC AAATTGAATT TGAATTAGAA
GAACCATTAA TTGATAATAA AGAAGCGCCT ATACGAATAA CCTTGGCCCA ATCATTGATT
AAAAAAGACA ACTTTGAATT TGTACTCCAA AAAGGTACCG AATTGGGAGC GACTGAATTT
TATCCCCTGA TAAGTCAACG TACAGAAGTG AATTTATTAA ATAAATCAGA CAAAAAAGTC
TCCAAAAAGC TAACTCGCTG GCGAGAAATA GTTAAAAACG CTGCAGAGCA ATGTCAGAGG
CAAGTACTAC CTCTAATTCA TTACCCCGTC AATTTTGAAA AGTATCTAAA AAATAACAAT
GAGAATTCGA ACAATAATGG TTCGAGATTA AAAATAATGT GTCATGAACA AGAAAACACC
CCCTTAAAAA AGGTCCTGAA AACTATCGAG ACTCCACCGT CTTCTGCTAT AATATTGATA
GGGCCAGAAG GGGGTTTTTC CCATAATGAA GTGGATTTAG CTCGGGAACA AGGTTTTTCT
TCTGTGAGTA TGGGTCCTAG AATACTAAGA GCTGAAACTG CAGGTATAGT TGCCGTCTCA
GCAATTCTAT ACGAATTAGC AGATTTGGGA GGAACTGAGC AATGTCAGAC GTACCAAGGG
TGA
 
Protein sequence
MTRVLRLKIG DRVILLDGKG GACFSFINRL GEGQIEFELE EPLIDNKEAP IRITLAQSLI 
KKDNFEFVLQ KGTELGATEF YPLISQRTEV NLLNKSDKKV SKKLTRWREI VKNAAEQCQR
QVLPLIHYPV NFEKYLKNNN ENSNNNGSRL KIMCHEQENT PLKKVLKTIE TPPSSAIILI
GPEGGFSHNE VDLAREQGFS SVSMGPRILR AETAGIVAVS AILYELADLG GTEQCQTYQG