| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1180 |
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| Symbol | |
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| ID | 6315802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1251345 |
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| End bp | 1252550 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642643553 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001917351 |
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| Protein GI | 188585806 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.219055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.00393596 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGATAAATA AAACGGATTA CAAAAAGGGA CTGTACATTC ATGTCCCTTT TTGTTTATCT
AAATGTAAAT ACTGCGATTT TAATAGTAGA GAACTTCAAT CCCAGGATGA AATAACAAAC
TACTTAAAAA CAATAAAAAA ACAGACTAAG ACATTTTACA GAAAACTTGG CCTTAACCAA
GAATCATGGG ACAGCATATA TATTGGTGGA GGAACTCCTT CTTGTTTAAC GGAAGAGGCT
TTACACGATT TATTGTCATT CTATATAGAG AACTCCAATA CTAGTTTTGA CAACGACGGG
CAAAGCAGAG AGATTACTGT GGAAGTGAAT CCTAATTCAA TCACTAGTGA AAAAGCGACT
ATTTTAGCTT CGAAAGTTAA TCGCATCAGC ATAGGCTTAC AGAGTACTCA TTCTAAATAT
TTAAAAAGGT TAGGAAGAAT ACACACATGG AATGATTTTA TTCGAGCTTA TGAACTCTTG
GTATCAAAAG GGATAGACAA TATTAATGTT GATTTAATCT ATGGCATTCC CGGACAAAGG
TTGGAAGATT TAGAACAAGA TCTGGATCTT CTTACGAATT TAACTCCTTT TCCCCCGAAA
CATATATCCT TGTATAATCT AACGATAGAA GAAGGAACTC CGTTAATGGA AGAATATCAA
ACAGGAGAAC TACCTATCCT TGATGAACAG TCTGAAGTGT CTATGTATAA CATGGCCAGG
GAAATCCTGC AAGATCGAGG ATATAAGCAC TACGAACTTT CTAATTTTTC TAAAGAAGGA
TATCAATGCC GACACAATTT AATCTACTGG TTAAGACATA ACTATTTGGG TTTAGGACCT
GGTGCGCACA GCTTGTGGAA TAGCAAAAGA TTTTATTGTA CCGAATCCAT TACAGACTAT
TTAAAAGCCA GTCAAGACCA AGACTTGGAT GAAAGAACCT TAATTCAAGA TTGCTGGGAT
GTATCACGAG AAGAAGCTTT ATCGGAAAGG ATTTTTTTAG GCTTGCGTTT GTTATCAGGT
GTTGATTTGG AAGAAATCTC TCAAGAGTTT CAATTAGATG TAGAGAAAAA ATTTGCTAAA
CAAATTAAAA AATTAATTGA TCAAGGATTT TTAACAAAAA CAGGTTCTGT TATTAAACTA
ACCGAAAAGG CATATATGCT GTCAAATTAT GTTTTTATGG AGTTCCTACC TCATCTTGAC
AAATAA
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| Protein sequence | MINKTDYKKG LYIHVPFCLS KCKYCDFNSR ELQSQDEITN YLKTIKKQTK TFYRKLGLNQ
ESWDSIYIGG GTPSCLTEEA LHDLLSFYIE NSNTSFDNDG QSREITVEVN PNSITSEKAT
ILASKVNRIS IGLQSTHSKY LKRLGRIHTW NDFIRAYELL VSKGIDNINV DLIYGIPGQR
LEDLEQDLDL LTNLTPFPPK HISLYNLTIE EGTPLMEEYQ TGELPILDEQ SEVSMYNMAR
EILQDRGYKH YELSNFSKEG YQCRHNLIYW LRHNYLGLGP GAHSLWNSKR FYCTESITDY
LKASQDQDLD ERTLIQDCWD VSREEALSER IFLGLRLLSG VDLEEISQEF QLDVEKKFAK
QIKKLIDQGF LTKTGSVIKL TEKAYMLSNY VFMEFLPHLD K
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