| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1162 |
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| Symbol | |
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| ID | 6315644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1230422 |
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| End bp | 1231852 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642643535 |
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| Product | L-seryl-tRNA(Sec) selenium transferase |
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| Protein accession | YP_001917333 |
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| Protein GI | 188585788 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00103584 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGAAGCAAT TGTTACGAGC TATCCCATCT GTCAATGAAT TAGTGGCAGA AACTGAAATT
CAGCAATATT TAAATTTTTA TAATCGAGAA ATGATTGTAG ATATAGTTAG AGAAGAACAG
GATAAACTTA GAAACGCAAT TATTAATCAT GATCAGGATT TAACTAAATT TATGGTTGAT
TATCAAGATG AAACAAAGGG TATCAAAGAA TATCTGATAA ATAAAATCTA TCAAATGATC
CAATCAAGAA CGGAAGCCAA ATTTAAGCGG GTAATAAATT GTACGGGAAC TGTATTACAC
ACCAATTTGG GACGTGCTCC TCTTTCATCG GGTATCATGG AGAAACTTAC AGAAACTGTT
TCAAACTATA GTAATTTAGA ATATGATTTG GACCAAGGTT CAAGGGGTAG CAGATATGAT
CATATAGAAG ATTTGATTAC TACTCTTACA GGTGCTGAAA GTGCTATGGT GGTAAACAAC
AATGCAGCCG CAGTCATGCT TGTCTTGAAA GCATTGGCAC AGGACAAAGA AGTGATACTT
TCGAGAGGTG AACTCGTAGA GATTGGTGGT AGCTTTAGAA TTCCTGAAGT AATGAAACAA
AGTGGTGCTC ATTTAGTAGA AGTTGGCACT ACCAATAAGA CTCATTTAAA AGATTATGAA
CAGGCAATTT CAGAAGAAAC AGGGTTGATT ATGAAGGTAC ACACCTCTAA TTATGAAATA
ATTGGCTTTA CAGACAGCGT TTCTCGCAGT GAACTGGTGG AAATGTCACA CAATAATGGG
ATCACAGTAG TGGAAGACTT AGGAAGTGGG CTTTTTCTAG ACTTAACAGA GTACGGTTTA
GATAATGAAC CTACTATAAA AGAAGTTTTA GATACTGGTG TTGATTTGGT AACATTTAGT
GGAGATAAAC TACTGGGAGG ACCACAAACT GGAATAATAG CTGGAAGAAG AGAGCTGATT
CAACTTTTAA AACAAGACCA ATTAACAAGG GCTCTTCGAG TTGATAAACT ATCATTAAAA
GCGCTAGAGG AAACCTTACG TTTATATTTA CAGCCAGAAC AAGCCAGGGA AAAGATACCA
GTTCTGAATA TGCTGACAAT ATCTCAGGAT GAAATCAAAA CACGTGCAAA ATTACTTTAC
GATAAACTTT CGGAATTTAT CACCAAAGAA TATAAATTAG AAATTGAATC TAATATTTCT
AGGGTAGGAG GAGGGGCTAT GCCAACCCAG GAATTACCGA CTTGGGTAGT TACTTTAACT
TGTTCATCAA CTGATCTTCA TAAAATTTGG GATCAATTGA GACAACAAAA CCCTCCTATA
GTTACAAGAT TGCAAAAAGA TAAATTGGTG TTTGACTTGC GAACAGTTTC AATTAAAGAA
ATAGACATAG TAGCTTCTAA AGTTACTAAA GTTATTATAA AGGGAGAGTG A
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| Protein sequence | MKQLLRAIPS VNELVAETEI QQYLNFYNRE MIVDIVREEQ DKLRNAIINH DQDLTKFMVD
YQDETKGIKE YLINKIYQMI QSRTEAKFKR VINCTGTVLH TNLGRAPLSS GIMEKLTETV
SNYSNLEYDL DQGSRGSRYD HIEDLITTLT GAESAMVVNN NAAAVMLVLK ALAQDKEVIL
SRGELVEIGG SFRIPEVMKQ SGAHLVEVGT TNKTHLKDYE QAISEETGLI MKVHTSNYEI
IGFTDSVSRS ELVEMSHNNG ITVVEDLGSG LFLDLTEYGL DNEPTIKEVL DTGVDLVTFS
GDKLLGGPQT GIIAGRRELI QLLKQDQLTR ALRVDKLSLK ALEETLRLYL QPEQAREKIP
VLNMLTISQD EIKTRAKLLY DKLSEFITKE YKLEIESNIS RVGGGAMPTQ ELPTWVVTLT
CSSTDLHKIW DQLRQQNPPI VTRLQKDKLV FDLRTVSIKE IDIVASKVTK VIIKGE
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