Gene Nther_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1102 
Symbol 
ID6314985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1165095 
End bp1165688 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content38% 
IMG OID642643474 
ProductATP-dependent Clp protease proteolytic subunit ClpP 
Protein accessionYP_001917273 
Protein GI188585728 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.270574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAA TACCCATGGT AATAGAACAA ACCAACAGAG GTGAAAGATC CTACGATATA 
TATTCTCGTC TGTTAAAAGA TCGGATAATA TTCATTGGAA CAGGCATAAA TGATGATATT
GCAAACTCAG TAATAGCCCA AATGCTATTT TTAGAATCAG AGGATCCTGA TAAGGATATT
CATTTGTATA TTAATAGTCC TGGCGGTCAT GTGCACGCAG GTTTGGCAAT TTATGACACT
ATGCAATATA TTCGATCAGA TGTTTCAACA ATTTGCGTTG GAATGGCTGC AAGCATGGGT
GCTGTACTAT TAGCTGCTGG GAATGAAGGT AAGAGATTCT GCTTGCCAAA TTCTCGAATC
ATGTTGCATC AACCTATGGG TGGTGCTCAA GGGCAGGCAG CTGACGTTGA GATCCATGCT
AGAGAAATAA TGAAGACAAA AGAGCGCTTG AATCAGATTT TAGCCCACCA CACAGGACAG
CCAGTTGAGC AAATAAGTAA AGATACAGAT AGAGACTTTT TCATGTCTAG TGAAGAAGCT
CAAAAATATG GTGTAATTGA TGATGTTTTA AAAAGGCCAC CTGAAAATAG TTAA
 
Protein sequence
MNLIPMVIEQ TNRGERSYDI YSRLLKDRII FIGTGINDDI ANSVIAQMLF LESEDPDKDI 
HLYINSPGGH VHAGLAIYDT MQYIRSDVST ICVGMAASMG AVLLAAGNEG KRFCLPNSRI
MLHQPMGGAQ GQAADVEIHA REIMKTKERL NQILAHHTGQ PVEQISKDTD RDFFMSSEEA
QKYGVIDDVL KRPPENS