Gene Nther_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1086 
Symbol 
ID6316611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1145160 
End bp1146020 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content41% 
IMG OID642643459 
Productelectron transport complex, RnfABCDGE type, B subunit 
Protein accessionYP_001917258 
Protein GI188585713 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.0696553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAG CTGTTTTAAG TTTAGGAGCT ATTGCGTTTA TTTTTGGATC TGTATTAGCT 
TATGCCGCGG AAAAATTTAA AGTCGAGAAA GACCCACGCA TAGAGGCAAT TGCTGAAGTT
GTGCCGGGTG CTAATTGCGG TGCCTGTGGG TATCCAGGTT GTGAAGCTTT TGCAGAAGCT
GTAGCCAGGG GAGAAGCTCC ACCTGAAGGT TGTACACCTG GAGGAAAGAA GGCAGCCGAA
CAGATTTCAG AGATACTGTC TAATGGAGCA GGTGAGAGCA ATGAGTTTAG CACCTTGGGT
TATGTGAAAG AAACCAATAA AGTGATACAG GAACCTTCTC AAAAATACAT TGCAGAAGTG
GCTTGCTTAG GCTCTAGAGA GTATTGTAAG GAGAAGTTTG AGTATGATGG AGTCAGAGAT
TGCCGGGCTG CAATGATGTA CCGAAATGGT CCAAAAGCTT GTGAATTTGG GTGTATAGGC
CTAGCTACCT GTGTTGAAAC ATGTCCTTTT GAAGCTATTG AAATGAGAGA TGACGGTCTT
CCTCGTATAA ACCATGATAT ATGCAGGGGC TGTGCCACTT GTGTAAATAC ATGTCCTAAG
AGTGTCATAA GATTGATACC GGGAGATAGG TACAAACATT TTATATATTG TAACTCTCAA
GAAACGGGAG AAATTGTAAA GGAAAACTGT CAATATGGAT GTCTTGGTTG TGGTATTTGC
CGTGAACAAT GTCCCGTTGG TGCTATAAAT TTAGATAATG ATTTAGCAGT TATTGATCAA
AATAAGTGTG TTAACTGTGG TTTGTGTAAA GATAAATGCC CAACAGCTTG CATTGTAAGT
GAATCTGAAA GACTTCAATA A
 
Protein sequence
MIEAVLSLGA IAFIFGSVLA YAAEKFKVEK DPRIEAIAEV VPGANCGACG YPGCEAFAEA 
VARGEAPPEG CTPGGKKAAE QISEILSNGA GESNEFSTLG YVKETNKVIQ EPSQKYIAEV
ACLGSREYCK EKFEYDGVRD CRAAMMYRNG PKACEFGCIG LATCVETCPF EAIEMRDDGL
PRINHDICRG CATCVNTCPK SVIRLIPGDR YKHFIYCNSQ ETGEIVKENC QYGCLGCGIC
REQCPVGAIN LDNDLAVIDQ NKCVNCGLCK DKCPTACIVS ESERLQ