Gene Nther_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1079 
Symbol 
ID6316518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1137755 
End bp1138960 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content35% 
IMG OID642643452 
Producttransposase mutator type 
Protein accessionYP_001917251 
Protein GI188585706 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.120456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0282753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAA TTGACAAAAA GAAAGTCAGA GAAATGATGA AGGAAGGAAA GTTGAAAGAT 
GTGAATGATA TTCAAGACTT ACTGAAGGAA CAGTTTGGCG AGCTGATAGA AGAAATGCTG
GAAGGCGAAC TTGACCATGA ATTAGGCTAC TCGAAGTATG ATTATCGAGA AAAAGAAACT
ACCAACAGTC GAAACGGGAA GAGAGAAAAA CAACTCAAAT CGAATTATGG TAATTTAGAA
ATAGAAGTAC CAAGAGACCG AGAAGGTGAA TTTGAACCAC AAGTAGTTAA AAAGAACCAA
CGAGACGTTT CAAGCATCGA TGATCAGGTT CTAAGCATGT ATGCAAAAGG CATGACAGTA
AGAGATATAC AGACTCATTT ACAAGAGCTT TATGGAGTGG ATGCTTCTCC TACACTCATT
TCCGGAATTA CAGACAAAAT AGTTCCTCTA ATTAAGGAGT GGCAAAACCG ACCGCTATCA
AGAATCTATG CTCATGTAGT TATGGATGCT GTCCATTACA AAGTGAGGCA AGATGGTAGA
ATAGTCAACA AAGCAGCTTA TATGGCTATA GGAATTGATT TAGATGGCAT GAAGGATGTT
TTGGGCATTT GGATTGGAGA AAATGAAAGT TCGAAATACT GGTTGAAGAT AATTAACGAG
TTAAAAAATC GAGGCGTAGA AGATATTTTA ATTGTATCAA TAGATGGTTT AAAAGGGTTT
GAAGATGCAA TACATGCTGT TTATCCGCAA ACAGAAATTC AAAGCTGCAT AATTCATCAG
ATTAGAAATA GCACAAGATA TATATCGTAC AAAGATCGAA AAGAATTCTG TAGTGATCTT
AAGAATGTTT ATAGAGCCCC AACTGAGGAA GTCGCTTTAA TAGAGCTAGA TAAACTCGAA
GAAAAATGGG GAGATAAATA TGAGATTTCC ATTAGATCGT GGAGAAATAA TTGGGACAAG
CTCTCTGTTA TGTTTAAATA TCCAGAAGAA GTTAGAAAAC TAATTTATAC AAACAATTCT
ATGGAAAGCT ACAACCGACA ATTAAGAAAA GTTACCAAAT CAAAAAGTAT CTTCCCTACC
GACGAATCCT TATTAAAAAT GCTTTATCTT GCTACAATGG ATATCACTAA AAAATGGACT
ATGAGAACAA AAAACTGGGC TCAGATTCTG GGACAATTGA GTATTTACTT TGAAGGAAGA
ATTTAA
 
Protein sequence
MNLIDKKKVR EMMKEGKLKD VNDIQDLLKE QFGELIEEML EGELDHELGY SKYDYREKET 
TNSRNGKREK QLKSNYGNLE IEVPRDREGE FEPQVVKKNQ RDVSSIDDQV LSMYAKGMTV
RDIQTHLQEL YGVDASPTLI SGITDKIVPL IKEWQNRPLS RIYAHVVMDA VHYKVRQDGR
IVNKAAYMAI GIDLDGMKDV LGIWIGENES SKYWLKIINE LKNRGVEDIL IVSIDGLKGF
EDAIHAVYPQ TEIQSCIIHQ IRNSTRYISY KDRKEFCSDL KNVYRAPTEE VALIELDKLE
EKWGDKYEIS IRSWRNNWDK LSVMFKYPEE VRKLIYTNNS MESYNRQLRK VTKSKSIFPT
DESLLKMLYL ATMDITKKWT MRTKNWAQIL GQLSIYFEGR I