Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1025 |
Symbol | |
ID | 6314427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 1095353 |
End bp | 1095859 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642643397 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_001917197 |
Protein GI | 188585652 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000320969 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.488495 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA ATCCATTTGA ATTAGCCTAT AAAAAATACC ATAGAGAACT TTACTTCTAC GCCTTATCAC TTTGCAGACA CGAAGAATTA GCTAAAGATC TAGTAAGCGA AACTTTTTAT AAAGCCTTCT TAACTTTAGA GACACCCGAT AATAATATAA AATTCTGGCT TTTTAGGGTT TTAAAAAATT TATTTATTGA TTATCAACGA ACAAGCAAAT ATCATTTTTC ACTAGAAGAT TATGAAATAA TTTTGGATAA TCAAAATCAA GATTCACCTT TGAAAAAAAT TATAAAAAAT GAAAGGGATC ATGAAATATA CAAAAAAATA TTATCTCTCA CTCCTAATAA TTACCGTGAA ATTATAATCC TCTATTATTA TGGAGGTTTA AGTATAAAAG AAATTGCTGT CACTTTGAAT TCCAATCCTT CAACCATTAA AACAACTTTA CATAGAGCGC GAAAGAAACT AAAAAGACTG ATGAAGGAGG ATATTTATGA GTTTTAA
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Protein sequence | MKKNPFELAY KKYHRELYFY ALSLCRHEEL AKDLVSETFY KAFLTLETPD NNIKFWLFRV LKNLFIDYQR TSKYHFSLED YEIILDNQNQ DSPLKKIIKN ERDHEIYKKI LSLTPNNYRE IIILYYYGGL SIKEIAVTLN SNPSTIKTTL HRARKKLKRL MKEDIYEF
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