Gene Nther_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1020 
Symbol 
ID6315146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1088271 
End bp1089716 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content39% 
IMG OID642643392 
Productcopper amine oxidase domain protein 
Protein accessionYP_001917192 
Protein GI188585647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.514045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT TAAAATTAAT TTTCACAATT GGATTGTCTT TACTATTGTT TACTACGGGA 
GTTTCAGCCA CAGCTACGCA GGACCGGGTT GATGTAGAAA TTGACGGAGA AATGGTAGTA
TTTGATGATG AAGTAGAAGC TTTAGTAGAT GAACAGGGAC GAACTATGGT TCCCGTTCGC
TTTATTTCAG AAGAACTGGG TGCTAAAGTG GAATGGTATC CTGACCATGA AAGTGACGGT
CTTGTGAAGA TTGAGCATGC TAATCAAAAG ATAGAGCTAT TTATAGGTAA CCAAGAATAC
CAGAACAATG GTATGAACGA ACAAATGGAT ACTGCCCCGA GAATATTGGA AGGAAGAACA
GTAGTCCCAT TACGTTTCGT TTCAGAAGCT TTAGGTGCTG AAGTTAATTG GGATGGTGAA
AAAAAATTGG TTTCTATAGT AACAGACGAT GACTTAGGTG ATGCTGCTGA GGGTTTAGAA
CAAGCCAAAG ATGATAGAAA TGATAAAGAT GACAAAGAAG AACAAAAGGA TAAAAAGGAT
GATAAAGATG ATGAAGAAAA ACAAAATCCT CAAATGAAAT TAAGTATTAG CGAAGAAAAA
TTTAGGGCAG ATGAGCCTGT AGAATTTGAA TTAACTAATA CTGGAAATAC AGAGCTGCGC
CCTATGCGAG TAGCCGATGT AGAATATTAT GACGAATCGG AAGATGAATG GCAAGAGATA
TACTTTAGTA TCAACTGGTT TCAAGAAGAT GAAAAGCAGG AGCCTGGAGA AACTTGGACC
TTTGAAACAG TTATGACAGA GAATTATCCC GGCTGGCCCA AAAGTGGTAA ATACAGAGCA
GAACAAGAAT TTGAGTGTAT GGATTCATGG CAAGAATTTA CAGTAGATTT GGAATTTGAA
ACTATTGACC CTGTCGATGA ATATCATCCA GACGAGTTAC CTGATGAATT AACAGAGAAT
GAACTTAAGT TGGCAGAAAA AATAAATGAA TACCGTGAAT CTAAAGGATT GGAACCATTC
AAGGTATCTA AATCACTAAC TACAGTTGCT AGATACCACG TATATGATAG TAACCAAAAT
CAACCGGAAA ACTGTAAAGA TGAAGACGGT AATGAAGGAA ATTTACATAG CTGGTCCGAT
GAAGGCCCCT GGGAAGAAGT TTGCTATACC CCCGATCATG AGCACGCAGA ACTTATGTGG
AGTAAGCCTT CAGAACTAAC TGATTATAAA GGTAATGGTT ATGAAATTTC GGCTATGCGT
TCGGGTGGGG CCGAACCTGA TAATGTTTTG GAAGGTTGGC AGAACTCGCC GCCTCATAAA
GACGTCATAG TAGGCAAAGG TAGCTGGAAA GATTTAGAAG TTATGGGCAT AGGTATAGCT
GGCCAGTATT CTCATGTCTG GTTTGGAATG GAAGATGATC CTGCAGGATA TTACTTAGAA
CCTTAG
 
Protein sequence
MKQLKLIFTI GLSLLLFTTG VSATATQDRV DVEIDGEMVV FDDEVEALVD EQGRTMVPVR 
FISEELGAKV EWYPDHESDG LVKIEHANQK IELFIGNQEY QNNGMNEQMD TAPRILEGRT
VVPLRFVSEA LGAEVNWDGE KKLVSIVTDD DLGDAAEGLE QAKDDRNDKD DKEEQKDKKD
DKDDEEKQNP QMKLSISEEK FRADEPVEFE LTNTGNTELR PMRVADVEYY DESEDEWQEI
YFSINWFQED EKQEPGETWT FETVMTENYP GWPKSGKYRA EQEFECMDSW QEFTVDLEFE
TIDPVDEYHP DELPDELTEN ELKLAEKINE YRESKGLEPF KVSKSLTTVA RYHVYDSNQN
QPENCKDEDG NEGNLHSWSD EGPWEEVCYT PDHEHAELMW SKPSELTDYK GNGYEISAMR
SGGAEPDNVL EGWQNSPPHK DVIVGKGSWK DLEVMGIGIA GQYSHVWFGM EDDPAGYYLE
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