Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1018 |
Symbol | |
ID | 6315144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1086377 |
End bp | 1087372 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642643390 |
Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
Protein accession | YP_001917190 |
Protein GI | 188585645 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000578122 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAA ATAAATTAGC AGTAGTTGGA ACAGGAGTAA TTGGTAACGG ATGGATTGCT AGAGGATTAG CAAAAGGATA TGATGTGATA GCTTATGATC CGGCTGAAGG GGCAAAAGAG CAAACTCATA AAGCTATCGA AAATGCCTGG CCTGCATTGG AAAAAATTGG ACTAGCCCCA GGTGCATCAA AGGAGAGATT GAAATTTGTA GATGATTTGC CTTCTGCAGT GACAGGAGCG GATTTGATTC AGGAAAATGT TCCTGAGAGA GAGCAGCTTA AAAGACAAGT TTTAGCTGAA ATAGATGAAC ATGCTCATTC AGAAGCTATT ATAGCTTCTA GTACTTCTGG GATTATTCCT AGTACTTTGC AAAAAGATTG TCGGCATAAT CCTGAACGTG TTATTGTAGC CCATCCTTTT AATCCCGTTC ATTTATTGCC ATTGGTTGAG CTAGTAGGTG GTGAGCAAAC TAGTTCAGTC GTAATTAATC AAGCTTATGA ATTTTATCAA CGGTTGGAAA TGCGTCCATT GGTAGTAAAA CAAGAAATTG AAGGTCATAT AGCTGACCGT CTGATGGAAG CATTATGGCG CGAAGCTCTT CATATCGTCA ATGACGGTGT GGCTACAACT AAAGATGTAG ATGATGCTGT AGTATACGGG CCCGGTTTGC GATGGGCATT GATGGGCACG TTTATGACAT TTCACTTGGC AGGAGGAGAA GGTGGAATGA GACATATGTT GCATCAATTT GGACCTGCCT TAAAAAAACC TTGGACTAAA CTTGAAGCTC CGGAATTGAC AGATGAATTA GCTGATAGAG TTATCAACGG TTGTGAAAGT CAAGCTGGTG ATACCTCTAT TAAAGAATGG GAACGACAAA GGGATGAATT TTTAGTAAAA CTTCTTGACC TGGTTAAAGA GTATTGGCCA GAGCAAGAGG ACAAGCCCTT AGACGGTCAA AATGAGCCAT ACGACAGTAA CTCTATGTCA GGTTAG
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Protein sequence | MSANKLAVVG TGVIGNGWIA RGLAKGYDVI AYDPAEGAKE QTHKAIENAW PALEKIGLAP GASKERLKFV DDLPSAVTGA DLIQENVPER EQLKRQVLAE IDEHAHSEAI IASSTSGIIP STLQKDCRHN PERVIVAHPF NPVHLLPLVE LVGGEQTSSV VINQAYEFYQ RLEMRPLVVK QEIEGHIADR LMEALWREAL HIVNDGVATT KDVDDAVVYG PGLRWALMGT FMTFHLAGGE GGMRHMLHQF GPALKKPWTK LEAPELTDEL ADRVINGCES QAGDTSIKEW ERQRDEFLVK LLDLVKEYWP EQEDKPLDGQ NEPYDSNSMS G
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