Gene Nther_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1018 
Symbol 
ID6315144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1086377 
End bp1087372 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content41% 
IMG OID642643390 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_001917190 
Protein GI188585645 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000578122 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAA ATAAATTAGC AGTAGTTGGA ACAGGAGTAA TTGGTAACGG ATGGATTGCT 
AGAGGATTAG CAAAAGGATA TGATGTGATA GCTTATGATC CGGCTGAAGG GGCAAAAGAG
CAAACTCATA AAGCTATCGA AAATGCCTGG CCTGCATTGG AAAAAATTGG ACTAGCCCCA
GGTGCATCAA AGGAGAGATT GAAATTTGTA GATGATTTGC CTTCTGCAGT GACAGGAGCG
GATTTGATTC AGGAAAATGT TCCTGAGAGA GAGCAGCTTA AAAGACAAGT TTTAGCTGAA
ATAGATGAAC ATGCTCATTC AGAAGCTATT ATAGCTTCTA GTACTTCTGG GATTATTCCT
AGTACTTTGC AAAAAGATTG TCGGCATAAT CCTGAACGTG TTATTGTAGC CCATCCTTTT
AATCCCGTTC ATTTATTGCC ATTGGTTGAG CTAGTAGGTG GTGAGCAAAC TAGTTCAGTC
GTAATTAATC AAGCTTATGA ATTTTATCAA CGGTTGGAAA TGCGTCCATT GGTAGTAAAA
CAAGAAATTG AAGGTCATAT AGCTGACCGT CTGATGGAAG CATTATGGCG CGAAGCTCTT
CATATCGTCA ATGACGGTGT GGCTACAACT AAAGATGTAG ATGATGCTGT AGTATACGGG
CCCGGTTTGC GATGGGCATT GATGGGCACG TTTATGACAT TTCACTTGGC AGGAGGAGAA
GGTGGAATGA GACATATGTT GCATCAATTT GGACCTGCCT TAAAAAAACC TTGGACTAAA
CTTGAAGCTC CGGAATTGAC AGATGAATTA GCTGATAGAG TTATCAACGG TTGTGAAAGT
CAAGCTGGTG ATACCTCTAT TAAAGAATGG GAACGACAAA GGGATGAATT TTTAGTAAAA
CTTCTTGACC TGGTTAAAGA GTATTGGCCA GAGCAAGAGG ACAAGCCCTT AGACGGTCAA
AATGAGCCAT ACGACAGTAA CTCTATGTCA GGTTAG
 
Protein sequence
MSANKLAVVG TGVIGNGWIA RGLAKGYDVI AYDPAEGAKE QTHKAIENAW PALEKIGLAP 
GASKERLKFV DDLPSAVTGA DLIQENVPER EQLKRQVLAE IDEHAHSEAI IASSTSGIIP
STLQKDCRHN PERVIVAHPF NPVHLLPLVE LVGGEQTSSV VINQAYEFYQ RLEMRPLVVK
QEIEGHIADR LMEALWREAL HIVNDGVATT KDVDDAVVYG PGLRWALMGT FMTFHLAGGE
GGMRHMLHQF GPALKKPWTK LEAPELTDEL ADRVINGCES QAGDTSIKEW ERQRDEFLVK
LLDLVKEYWP EQEDKPLDGQ NEPYDSNSMS G