| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1006 |
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| Symbol | |
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| ID | 6316571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 1070575 |
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| End bp | 1072695 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642643378 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_001917178 |
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| Protein GI | 188585633 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.794385 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGAGA TTTCTTTAAT TACAGGTTCT AGCAAGACCC TGGAAACATT GTTATCTCAA
CTACAAGAAT ATACCTGTGA AAGTAAAGAT ATTAATTTGT ATTCATATGC TTTAGATGAA
ATTAAGGGTC CCCCCTACTT TGGAAATGTG GTCATATTTT CCAGTCCAAT AGTTAAACAA
GAACTAGAGG AAATATGGGG ATTAAATATT CCAAAGTCTT CTGAAGTAAT TATCGCTGAT
AGAACTATCA ACTACGAATT TATTGATCGA ATAGTATTGC TGCCATCGAG AACAAAAGTT
TTATTTGTAA ATGATGCTAA AGAATCTGCT TTAGAGGGAA TTGAAGCTCT ACAAGAAATC
GGTATTGACC ACCTAGAGTT TCATCCATAT TACCCTGGTA TTGAGTTTTG CGATTCTAAA
CTAAAGGATA TAAACATTGC CATCACCCCC GGTGAAAAGG ACAGAGTGCC AAAGCATATT
AACAAAATCT ACGATATTGG CCCTAGACTT CTAGATTTTA CTACTATCAT GAAAGTACTC
AAATCAATTG GTCAGTTGGA AAGTCGTGGA AGACAATTCT CAAACAATTA CCTTCAAAAA
ATTATTACAA TGGCTAAAAG ACTATCTCAT TCCGCAAATT GTATTTCCGA ATTAAATCAA
CATTTAAATA CTGTCATTGA TGGCCTACAA GATGGTTTAG TTGTTTTTGA CACCCAAGGC
AGAATTAGCG TATATAATGA GAATTTTCGC AGAATGATGG AAATACCAGA AGCAAATTTA
CGTGGTCGCA AAATAAGTGA CGTAATCTAT CAAAAGCCGT TAAAAGAATT TCTCATGAAT
TACGATACAG AACAAGAACT ATCCATAGAT TTGGATAAAG ACAAACTTTT AGTTTCCAAA
ATTAAATTGA TGGACAATAA TTATCTAGTT GGAAGGTTTC GAAGCCAAAA AAATTCAACG
GAATATCGTG AAGCTAAAAA TATTGAAAAG GGTCATTTTG CCAAACACAC TTTTGACAAT
ATTGTTGGTA AAAGTTCGAT TGTGACTTAT ACGAAAAATA TTGCTCATAA GCTTTCCAAA
ACAGAACTCA CTATCCTGTT AGAAGGAGAA AGTGGGACTG GTAAAGAGCT ATATGCAAAT
GCTATTCACA ATTCCTCCCA CAGAAAAGAT GCTCCTTTTT TAGCAGTTAA TTTTAGTGCC
TTACCTGATA ATTTAATTGA AAGTGAACTC TTTGGCTATG AAGAAGGAGC TTTTACAGGA
GCTTCCAAAG GTGGTAAACC TGGTTTATTT GAACAGGCAG ATGGAGGAAC TATCTTTTTA
GATGAGATTG GAGACAGTTC ACTAAAAGTA CAAGCTCGCC TATTGAGAGT TCTGCAGGAA
AAAGAAGTCA TGAGAATTGG AGCCACCAAA ATACGACCGG TAAATGTAAG AGTAGTAGCA
GCAACTAATA AAAACTTAAA ACAATTAATA GCTCAAGGCA ACTTTAGACA AGATCTATAC
TATCGCTTAA AGATGGGATA TATAAAAATA CCTGCTCTTC GTGACAGAAA AGAAGATATT
CCAAAGCTGT TAGACTATTT AATTAAAATC GAAACAGCTG CTGATATAAA ATTTGATGAT
GAAGTCCTGA ATATTCTAAA AAACTATGAT TGGCCGGGTA ATATTAGAGA ATTAAAAAAT
GTAGTCAGTT ATATGCTGGC AGTTAGACAA AATGACTACC TAACTATTGA AGATATTCCA
CACAAAGACT ATTTTGAATA CCGTCACAAC CACGTAAAAT CAGTTGAAAA TAATGTAGAT
AACTTAAGCT GTAATACCTC TGACCAAAAG ACCCATTCAA GTGTTGAATC ATCTTCAGGA
AATAACGCTA TATCTCCTCT TTCACAAACA GATAAATTTA TTTTAGCTGC CATTGAAAAT
TTAACTCAGA GCGATAAAGT TGCTGGTAGA AAGAAAATAT CCGAACTAAG CCAGAAGAAC
CAAGAAAATT TAACTGAAGC TCAAGTCAGA ACCAGGTTGA ATAATCTAGC CAAGGAAGGT
TATGTGAAGA AACATAAAGG TCGTGGATGT AATTTAACAG ATAAAGGAAA AAATTTATTG
CGTGATAACG AAATTAGTTA A
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| Protein sequence | MHEISLITGS SKTLETLLSQ LQEYTCESKD INLYSYALDE IKGPPYFGNV VIFSSPIVKQ
ELEEIWGLNI PKSSEVIIAD RTINYEFIDR IVLLPSRTKV LFVNDAKESA LEGIEALQEI
GIDHLEFHPY YPGIEFCDSK LKDINIAITP GEKDRVPKHI NKIYDIGPRL LDFTTIMKVL
KSIGQLESRG RQFSNNYLQK IITMAKRLSH SANCISELNQ HLNTVIDGLQ DGLVVFDTQG
RISVYNENFR RMMEIPEANL RGRKISDVIY QKPLKEFLMN YDTEQELSID LDKDKLLVSK
IKLMDNNYLV GRFRSQKNST EYREAKNIEK GHFAKHTFDN IVGKSSIVTY TKNIAHKLSK
TELTILLEGE SGTGKELYAN AIHNSSHRKD APFLAVNFSA LPDNLIESEL FGYEEGAFTG
ASKGGKPGLF EQADGGTIFL DEIGDSSLKV QARLLRVLQE KEVMRIGATK IRPVNVRVVA
ATNKNLKQLI AQGNFRQDLY YRLKMGYIKI PALRDRKEDI PKLLDYLIKI ETAADIKFDD
EVLNILKNYD WPGNIRELKN VVSYMLAVRQ NDYLTIEDIP HKDYFEYRHN HVKSVENNVD
NLSCNTSDQK THSSVESSSG NNAISPLSQT DKFILAAIEN LTQSDKVAGR KKISELSQKN
QENLTEAQVR TRLNNLAKEG YVKKHKGRGC NLTDKGKNLL RDNEIS
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