Gene Nther_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1005 
Symbol 
ID6316570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1068878 
End bp1070386 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content39% 
IMG OID642643377 
Producthypothetical protein 
Protein accessionYP_001917177 
Protein GI188585632 
COG category[S] Function unknown 
COG ID[COG1288] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAC CAAAGTTTCA GGCTCCCGAT ACCTATGTAA TTATTTTCTT TGTGGTATTG 
GCAGCTGCTT TACTCACCTT TATCGTTCCT ATCGGTTCTT TTGAAACTGA AGAGGTTACC
GTCGAAGAGC TAGACGATAC CAGAACAGTC ATTGATCCCG AATCTTTTAG TTATGTTACA
GACGATGATG GCGAAAAAGT TAGAGAAGGT ATCTCATTGT TTGAACCATT TGGTGGTGTT
GGATTTTTAA ATTATATGTT TGAAGGTATG GTAGCTGGTG ACAAGTGGGG TGCAGCAGTT
GGTGTTGTCG CCTTTATTCT AGTAATTGGT GGTTCTTTTG GAATTATTTT AAAAACTGGG
GCTGTTAATG CAGGAATTCT TAGTATGATT GAAAAAACCA AGGGTAGAGA AGTTTTATTA
ATACCTGTAT TGTTTTTTAT GTTTTCCCTT GGTGGAGCCA TCTTTGGCAT GAGTGAAGAA
GCTATGGCCT TCGCCATGAT AGTCATTCCA ATAGTTATAG CCATGGGATA TGACTCAATT
GTAGGAATAT GTATCACCTA TGTAGCCACT CAAATTGGTT TTGCTACATC ATGGATGAAT
CCTTTTGGCG TGGCAATCGC ACAAGGTGTG GCAGATGTTC CTGTTTATTC AGGAGCCGGA
TTTCGCATGG TATTGTGGAC TATTTTCACA GCTGTAGGGA TAGCTTATAC TTATTCCTAT
GCTAGAAAAA TTAAAGAAGA CCCAGCCAAA TCTATTGCTT ATGAGAGTGA TCGGATACAT
CACAGTGATT CCATCAAAGA AGGACAAAGT CAAGAAAAAA TCAGTGAAGG ATTTAGTTTA
GGACATGCTT TAGTACTTAC TACTATTGGT TTAGGAATAG TATGGATTAT TTGGGGTGTT
GTAAACCACG CTTACTATAT TCCGGAAATT GCAACACAAT TTTTCACTAT GGGGATAATT
TCAGGGATTA TTGGAGTCAT CTTTAAGTTA AATGATATGA CAATAAATGA TATTGCAGGT
TCTTTTAAAG ATGGTGCAAA AGATCTCGTA GGAGCAGCCT TAGTTGTAGG TATGGCTCAG
GGTATTATCT TGGTTTTAGG TGGTACTGAT CCCGAAAACG GAACAGTACT AAACACTGTA
CTTAACTGGG TTGGTGGTGC CATTGGAAGT TTTCCAGCAG CGATTTCAGC ATGGTTTATG
TATTTATTCC AGTCAATTTT CAATTTCTTC GTAGTCTCCG GTTCAGGCCA AGCTGCCCTG
GTCATGCCAT TAATGGCTCC TCTAGCTGAT CTTGCAGGTG TTGCCAGGCA GGTAGCCGTT
TTGGCATATC AAATGGGAGA TGGATTTACA AACATGATCG TTCCAACATC GGCCTCTCTT
ATGGGTGTAT TGGGAGTAGC TGGATTGGAT TGGAGTAAAT GGCTTAAATT TATATTTAAG
TTCCAAATTA TCCTATTTGT CATGGCTTCC TTAGCAATCA TTACAGCTGT AATGATTGGT
CTGCAATAA
 
Protein sequence
MSKPKFQAPD TYVIIFFVVL AAALLTFIVP IGSFETEEVT VEELDDTRTV IDPESFSYVT 
DDDGEKVREG ISLFEPFGGV GFLNYMFEGM VAGDKWGAAV GVVAFILVIG GSFGIILKTG
AVNAGILSMI EKTKGREVLL IPVLFFMFSL GGAIFGMSEE AMAFAMIVIP IVIAMGYDSI
VGICITYVAT QIGFATSWMN PFGVAIAQGV ADVPVYSGAG FRMVLWTIFT AVGIAYTYSY
ARKIKEDPAK SIAYESDRIH HSDSIKEGQS QEKISEGFSL GHALVLTTIG LGIVWIIWGV
VNHAYYIPEI ATQFFTMGII SGIIGVIFKL NDMTINDIAG SFKDGAKDLV GAALVVGMAQ
GIILVLGGTD PENGTVLNTV LNWVGGAIGS FPAAISAWFM YLFQSIFNFF VVSGSGQAAL
VMPLMAPLAD LAGVARQVAV LAYQMGDGFT NMIVPTSASL MGVLGVAGLD WSKWLKFIFK
FQIILFVMAS LAIITAVMIG LQ