Gene Nther_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1000 
Symbol 
ID6316565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1064087 
End bp1064281 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content37% 
IMG OID642643372 
Productphage shock protein C, PspC 
Protein accessionYP_001917172 
Protein GI188585627 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.290499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA AATTATATCG CTCAGATTCC GACAAAATGA TTGCAGGTGT TTGCGGCGGC 
TTCGCCGAGT TTTTCAATAT AGATTCTACT GTTATTCGCT TGGCCTTTGT ATTATTAGCT
TTAATTACAG CAATTTTACC TGTAATACTT TTTTACGCGA TAGCTTACTT TGTGGTCCCA
GAAGCTAGTA CATAA
 
Protein sequence
MSKKLYRSDS DKMIAGVCGG FAEFFNIDST VIRLAFVLLA LITAILPVIL FYAIAYFVVP 
EAST