Gene Nther_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0997 
Symbol 
ID6316854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1062274 
End bp1063149 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content32% 
IMG OID642643369 
ProductABC transporter related 
Protein accessionYP_001917169 
Protein GI188585624 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.437755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTA TTTGTTTTGA AAATGTTTCT AAGAAATTTG GTGACTCAAA AATTATCGAC 
GATTTTAATT TAACAATAGA ACGTGGCACA GTATTTGGTT TTATCGGACC CAATGGAGCT
GGGAAAACAA CTACCATAAA AATGCTGACA GGGCTTATTA AACCGACGAC AGGATCAATA
AAAATACTTA ACCAAGATAT CTCAAATGGA TATCAAATTT TAGATCACAT TGGTTATGTT
TCCGAAGAAA GTAATCTTTA TAATTACATG ACTTTCCAAG GTATTTTAAA CTTTGCGAAA
GGTTTTTATA CTAATTGGGA TCCGAGTCTA GTCGATAAGT ATACGGAGTT TTTTCGGCTT
CCTTTAAATC AACCTATTAA GGAATTTTCT AAAGGTATGA AAGTAAAAGT TTCTCTCGTT
CTAGCACTGG CCCATAACCC CAAAATTTTG ATATTAGATG AACCAACAAG TGGGCTAGAC
CCTATTTTTA GAAGGGAATT TTTAAATGTT CTAGTAGAAG AAATGACTCA ATCAGAGAAA
ACTATTTTCT TTTCATCTCA CATTATTGAT GATGTTGAGA GAATTGCTGA TCAGATAGGC
ATAATTAATG ATGGGCGGTT GTTGAAAGTT AGAGATATGG ATGAACTTAA AACCAATGAA
AAGAAGATTA GAGTTGTTTT TCAAAGAGAT ATTGAATCAG AATTTTTTGA TTTTCCAGGC
ATAGCAAAAG TAGAGAAAAG TGATAATGCC TATATTTTAA CAGTCTCAGA GAATTTTGAG
GAAATTTATC AAAGATGTAA AAGTAAACCT CACTTTACCC TTGATGTAAT TGAACAGAGT
CTCGAAGACA TTCTAATTAA TACTTCTGGG AGGTAA
 
Protein sequence
MSAICFENVS KKFGDSKIID DFNLTIERGT VFGFIGPNGA GKTTTIKMLT GLIKPTTGSI 
KILNQDISNG YQILDHIGYV SEESNLYNYM TFQGILNFAK GFYTNWDPSL VDKYTEFFRL
PLNQPIKEFS KGMKVKVSLV LALAHNPKIL ILDEPTSGLD PIFRREFLNV LVEEMTQSEK
TIFFSSHIID DVERIADQIG IINDGRLLKV RDMDELKTNE KKIRVVFQRD IESEFFDFPG
IAKVEKSDNA YILTVSENFE EIYQRCKSKP HFTLDVIEQS LEDILINTSG R