Gene Nther_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0993 
Symbol 
ID6316850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1057557 
End bp1058915 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content37% 
IMG OID642643365 
Productpeptidase M20 
Protein accessionYP_001917165 
Protein GI188585620 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0767471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.440211 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCTC AAGTTTTTTC CCATATAGAG GATAATAAAG AGAAGTATTT AGATGAGTTA 
AAAAAGTTGG TAAAACAACC AAGTATCAGT ACTAAAAACC AAGGAATAAC TGAATGCGCA
AAAATGATAC AAAAATTGAT GAAAGAAACT GGAATCACAA CTAAACTAAT CCCTACTTCA
GGTCATCCCA TAATCTATGG CGAGTTAATC ACTTCAGAAT CAGCACCCAC AATAATCTTT
TACGGTCATT ACGACGTACA ACCCCCTGAA CCATATGAAT TATGGCATAC CGAACCTTTT
GAACCAGAGG TGAAAAACCA ACGTCTTTAT GGACGAGGAG TAGGAGACAA CAAGGGACAG
TTATTAACCC ATATTTTAGC AGTTCGGTCT TATTTGGAAA CAAAAGGTCA ACTTCCAGTT
AATGTAAAGT TCGTTTTCGA AGGAGAAGAA GAAATAGGCA GTCCACATAT AGCTCAATTT
GTAAAAGAAA ATAAAAATTT GCTTAAGGGT GACTTAGTTT ATATTTCAGA CGGGCCACTG
GCACCTGGAG ACGCGCCAGT GGTTTCTCTT GGAAATCGGG GGATATTATC AGTCCAATTA
AGTATCAAAA CTGCAAATAG AGATAATCAT TCTGGTAATC GTGGTGGGGT TATTCCAAAT
GCCGCTTGGG AACTAGTAAC CGTGCTAAAC TCCCTTAAAA ATGAAAAAAA TAAAGTATTG
ATCCCTGAAT TCTATAAAGA TGTCATAAAA CCTGGATCAG CAGAACTCGA CTTGATTCAA
CGATTGCCAT TTGACTCGCA AAAAACAGCC GAAGCTTTTT ATGTAGATGA AAGCGATTTA
GAGAAAGAAA ATTTTTATAA AAAACTAACA CTAGAACCAG TATTAAATAT CAATGGTATC
GTAAGCGGTT ATACCGGTGA AGGAACTAAA ACCATTATCC CCTGTCAAGC TAGTGCTAAA
CTTGATATGA GATTAGTACC AGACCAGGAT CCAGAACATA TTTTCCATAG ACTTTCAGAA
TGGGTCAAAA AAATAAATCC CCGCACCCAA GTTGAGATGC AGGGACGTTA CATGTATCCG
TCCAGAACAA GTCCTAAACT TTCAGCTATT CAACATATAA CAAAATCTGT TGAACAAGTT
CATAATACAA AACCATTAGT CTATCCTTCC ACAGGTGGCA GTTTACCCAC CTATGTTTGG
ACGAAAATTT TAAATTTACC AGCTGTCACT GTTCCCTATG CCAATTCAGA CGAAGCCAAT
CATGCTCCTA ATGAAAATTT GAAGCTAGAT TTGTTCTATA AAGGAATAAA AACATCTTGC
CAGGTCCTTG ATAATTTATC TCTGCTCAAA AATCACTGA
 
Protein sequence
MISQVFSHIE DNKEKYLDEL KKLVKQPSIS TKNQGITECA KMIQKLMKET GITTKLIPTS 
GHPIIYGELI TSESAPTIIF YGHYDVQPPE PYELWHTEPF EPEVKNQRLY GRGVGDNKGQ
LLTHILAVRS YLETKGQLPV NVKFVFEGEE EIGSPHIAQF VKENKNLLKG DLVYISDGPL
APGDAPVVSL GNRGILSVQL SIKTANRDNH SGNRGGVIPN AAWELVTVLN SLKNEKNKVL
IPEFYKDVIK PGSAELDLIQ RLPFDSQKTA EAFYVDESDL EKENFYKKLT LEPVLNINGI
VSGYTGEGTK TIIPCQASAK LDMRLVPDQD PEHIFHRLSE WVKKINPRTQ VEMQGRYMYP
SRTSPKLSAI QHITKSVEQV HNTKPLVYPS TGGSLPTYVW TKILNLPAVT VPYANSDEAN
HAPNENLKLD LFYKGIKTSC QVLDNLSLLK NH