Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0991 |
Symbol | |
ID | 6316848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 1054987 |
End bp | 1056414 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642643363 |
Product | MATE efflux family protein |
Protein accession | YP_001917163 |
Protein GI | 188585618 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000156724 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.091152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGTG AGCAAAATTC AAATCAACAA TCCAATTCAA TACTATTAGA AGGAGAAAAT CTTACTAATA GTGAAATCCG CAAAAAAGTA ATTTTCCTGG CATGGCCAGC CATTATTGAA ATGTTTTTGA TGACATTTAA GCAAATCGTT GATAATGCCA TGGTAGGAAG GCTAGGAGAA GCGTCAATTG CTGCCGTTGG CTTATCAATG TCTCCCATGA TGTTTTTTAT GGGATTGTTC GCAGCATTAG GTGTAGGCAC TACAGCAGTA GTTGCTAGAC ATATAGGGGC AAAGGAACAT AATCAAGCGA ACCTGGCGGG ACGACAGGCT ATTATTATGA GCGTGGCAAC AGCCTTGTTA GTAACTTCAA TAGTTTTTCC TCTTGCTCCA ACTATAATTA ACTTGATGGG TGCCGAACCG GAAGTGGTCC CCTTAGGTAC AGATTATTTG AGAATTATCA GTGCAGGTAT TTTATTTATT TCATCTTCTT TTATATTAAG CGGTGTCTTA AGAGGTGCAG GCGACACTAG GACCCCTATG CGGGTTAATG CTGTTGCCAA TGTTGTTAAT ATCATATTGA ACTTTTTATT GATTTTTGAA ACTCGAGAGA TGTCATTCTT AGGAATAGAA TTCCTGATGC CAGGCGCTGG AATAGGAGTA CAAGGGGCAG CATTAGGGAC TAGTATTTCC CGGGCAATAG CCTCTTTATT AGTTGTTAAA ACCTTATTAA AGGGAAAATC CGTGATAAAG ATTAATTTGT CAGATTCCTT TCGGCCTGAT TTTACTATGA TAAAAAGGAT AGTTAAAGTA GGGATTCCGA CAGCAATTGA GCGGATGGCC ATGAGTTCAG GCCAGGTGTT ATTTACTAGG ATAGTTGCAA GTTTGGGAAC CACAGCTACT GCCGCTCATC ATATGGCCAT TAACGCAGAA TCCTTGTCTT TTATGCCCGG TTTTGGGTTT TCCATGGCTG CTACAACTTT GGTTGGTCAA GGCCTTGGAG CCAAAGATCC TAAACTTTCA GAGCGTTGTG GACTAGAAAC CTGGCGTTTG GGTGCCGGTG TAATGAGTTT CATGGGATTA ATATTCTTTT TCTTTCCCCA TGTACTGATG AACTTCCTAA CTAATGAGCC TGAGGTTATA GATCTTGGTG TGATGTGTCT TAGAATAGTA GCCCTGGCAC AGCCTCCCTT TGCGACTGCT ATTATACTGT CAGGAGGTCT TAGAGGGGCA GGAGATACTA CTTTCCCAGC TGTAACAACG GCAATCGGAA TGTTGGGAGT AAGATTGATT TTAGCTGTTT TATTTGCCTT TGTGTTTAAC TGGGGATTAT TTGGAGCATG GTTGGCAATG GCTAGTGATC TGTATGTTCG AGGAATTTTA GTATTTTTAA GATTTAAATC CGGTAAATGG AAGGAAATAA AAGTTTAA
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Protein sequence | MSSEQNSNQQ SNSILLEGEN LTNSEIRKKV IFLAWPAIIE MFLMTFKQIV DNAMVGRLGE ASIAAVGLSM SPMMFFMGLF AALGVGTTAV VARHIGAKEH NQANLAGRQA IIMSVATALL VTSIVFPLAP TIINLMGAEP EVVPLGTDYL RIISAGILFI SSSFILSGVL RGAGDTRTPM RVNAVANVVN IILNFLLIFE TREMSFLGIE FLMPGAGIGV QGAALGTSIS RAIASLLVVK TLLKGKSVIK INLSDSFRPD FTMIKRIVKV GIPTAIERMA MSSGQVLFTR IVASLGTTAT AAHHMAINAE SLSFMPGFGF SMAATTLVGQ GLGAKDPKLS ERCGLETWRL GAGVMSFMGL IFFFFPHVLM NFLTNEPEVI DLGVMCLRIV ALAQPPFATA IILSGGLRGA GDTTFPAVTT AIGMLGVRLI LAVLFAFVFN WGLFGAWLAM ASDLYVRGIL VFLRFKSGKW KEIKV
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