Gene Nther_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0990 
Symbol 
ID6316847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp1052786 
End bp1054399 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content39% 
IMG OID642643362 
Productcarbon starvation protein CstA 
Protein accessionYP_001917162 
Protein GI188585617 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000027285 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0507495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTT TTGGCTATTT GATTGGTTCT TGGGCCGTGT TGTTAGTTGC ACACAAGGCT 
TTAAAAAAGC CTGTAGAAGG AATCGCCAAG GTTGACCCCA CAGCAGAAAC AATAGCTCAC
ACTATGTATG ATGGAGTAGA TTATACTCCT CAGAACAAGT ATGTGTTATT TGGACACCAC
TGGATGTCTA TAGCTGGTAC TACTGCGATT TTTGCTTCGA TTACAGGCTT GATTTGGGGT
TGGCTGCCCT CATTAATTTG GATGCTAGTG GGTGTACACT TTGCTGGGGC AACTACTGAT
TATTTTGCGG GCATGTATGC GGTTAAGAAC CAGGGAAAGT CTATGGGCGA GCTAGCTTCT
GAAAAAATTC ACGAGAGAAC TGGGACTTTA TTAACAGTAC TGTACTTTTT AGCTGGATTA
ATGGTAACCA GTATGTTTAT TGAAGTTATG GCAGATACTG TGGTAGGTGT TCCCGAAGCA
GGTTTACCAA TATTACTACT AATTCCCGTG GCCATGTTAT TCGGAGTAAC AATTAAAAAA
GGGTTTCCTC TTGGACCGAC TACAGCCGTT TTTGTAATAC TGCTATTGAT AGTTGTAGGT
ATAGGGGCTA ATTTCCCTCT TAACCTGTCT GTGAATGCTT GGATGGCTGT TTTTATATTT
TATACACTTG GCGCTATTAC CATACCCGTT TGGGTTTTGC TATCTCCCAG AGACTATCTA
AATACTGTGC TTGTTATCGG AGGATTAATT TTAGGAGCTT CAGCCATGTT AATCTTTAGA
CCAGAAGTAC AGTTACCTAT GTACACATCT TTTTTTACAG AACGTGGTCC CCTTTGGCCC
ATGATAATGG CAACAATCAC GTGTGGAGCA GCTAGTGGAG TGCATCAACT AATTGCATTC
GGCACAACAG CCAGACAATT AGAAAAAGAA AAAGATGGCT ATTTTGTTAT GTTTGGTGGT
ATGCAAGGAG AAACTTTTAT GGCAGTTGTT TCGGCAGCTA TGATCATGAC TTTTTTCTCA
TATGATGGGT TCATGGAAAG TGCTTATCCC GATCCCGGAG GCGCGTTTTC TAACGCTTTA
GCTAATGCTT TAGAATTATA TGGTCTAGAT CCCGTTTGGG GAGGAACCAT TGGCGCTTTA
ACATTTGGAG CATTATTATT AACAACATTG GATTCATGGG CGAGAAATGG TCGATACTTA
CTTCAAGAGC TCACCTGGAA CTATTTTGGT AAAAGCAGAA TAATTACAAG TATTGTGTTT
ATGATTATTG CAGTAATAGT ACTTTTTTAT ACGCCGGTCA TGGACCTTTG GTCAGGAATA
GCGTTAGGTT CTATTACCTT ACTTACAGTT CCTTTGAGTC TTTTGATAAT TGATCGACTT
GAAAGTGGAG AGGTTTTTGA CAGAAACTTC AAGATTTTTG TAGTAGCTCC GTTAATAGTT
ATATATCCAT CGGCTTTAGC TGCAGTCATT TACGAATTAT ATCGTTTTGT AGTTGAACAA
AATTGGCTCA GTTTTGTTTT AATGGTCTTT ATGGCATATG TAATTGTTAG TATGGCATAT
TACAGTATCT CTAAAATTTT AAGATTGCTT AAAGAGAGAA AAGCAGAAAT TTAA
 
Protein sequence
MGIFGYLIGS WAVLLVAHKA LKKPVEGIAK VDPTAETIAH TMYDGVDYTP QNKYVLFGHH 
WMSIAGTTAI FASITGLIWG WLPSLIWMLV GVHFAGATTD YFAGMYAVKN QGKSMGELAS
EKIHERTGTL LTVLYFLAGL MVTSMFIEVM ADTVVGVPEA GLPILLLIPV AMLFGVTIKK
GFPLGPTTAV FVILLLIVVG IGANFPLNLS VNAWMAVFIF YTLGAITIPV WVLLSPRDYL
NTVLVIGGLI LGASAMLIFR PEVQLPMYTS FFTERGPLWP MIMATITCGA ASGVHQLIAF
GTTARQLEKE KDGYFVMFGG MQGETFMAVV SAAMIMTFFS YDGFMESAYP DPGGAFSNAL
ANALELYGLD PVWGGTIGAL TFGALLLTTL DSWARNGRYL LQELTWNYFG KSRIITSIVF
MIIAVIVLFY TPVMDLWSGI ALGSITLLTV PLSLLIIDRL ESGEVFDRNF KIFVVAPLIV
IYPSALAAVI YELYRFVVEQ NWLSFVLMVF MAYVIVSMAY YSISKILRLL KERKAEI